Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1130 197 8e-49 seq2256 111 9e-23 >seq1130 Length=5783 Score = 197 bits (218), Expect = 8e-49 Identities = 114/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2608 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 2549 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2548 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2492 >seq2256 Length=44212 Score = 111 bits (122), Expect = 9e-23 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||| ||||||||||||||||||||| || |||||| ||| Sbjct 27639 GAACCCAAAAACTTTGATTTCTCGCAAGGTGCCGAGCGAGTCAAAAAGAAAACATCTCCC 27580 Query 61 GATCCCTAGTCGGC 74 |||||||||||||| Sbjct 27579 GATCCCTAGTCGGC 27566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278391201690