Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq481 75.2 3e-11 >seq481 Length=22500 Score = 75.2 bits (82), Expect = 3e-11 Identities = 114/161 (71%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | ||||||| Sbjct 11610 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGTTGTTGT 11669 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | ||||| | | ||||| ||| |||||||| |||| Sbjct 11670 ATCGTTAAATCATTCATGCAAGACCGCACTTAACGGCCAAGGTATTCCGCTACCTCAGGA 11729 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA 167 || | | | || ||||||| || | | ||| ||| |||| Sbjct 11730 CCCTCA-GGATAAGGCCGCCATTGATCAGGGTTTCCTTCAA 11769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260757498432