Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2078 509 3e-142
seq2190 98.7 2e-18
>seq2078
Length=3197
Score = 509 bits (564), Expect = 3e-142
Identities = 290/295 (98%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct 1946 TACTAAGCTGAATTACCATTGCGGTGACGATCATCAGTAGGGTAAAACTAACCTGTCTCA 2005
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2006 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 2065
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2066 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 2125
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2126 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 2185
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2186 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 2240
>seq2190
Length=27998
Score = 98.7 bits (108), Expect = 2e-18
Identities = 82/98 (84%), Gaps = 3/98 (3%)
Strand=Plus/Plus
Query 116 ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTC 175
|||| ||| |||||||||||||||||| |||| |||||||||| ||| |||||| | | |
Sbjct 1051 ACCGGATTTTGCTTCGGTATGATAGGA-GAGCGGACATCGAAGAATCGAAAAGCGAAGCC 1109
Query 176 GCTATGAACGCTTGGCTGCCACAAGCCAGTT--ATCCC 211
|||||| ||||||||||||| ||||||| |||||
Sbjct 1110 ATTATGAATTCTTGGCTGCCACAGGCCAGTTGAATCCC 1147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854371198176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |