Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1130 172 7e-41
>seq1130
Length=5783
Score = 172 bits (190), Expect = 7e-41
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||
Sbjct 2347 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATCATTCCATGCTAATGTATTCG 2288
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 2287 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 2228
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| ||| | || |||| | |||
Sbjct 2227 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGC 2169
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 2168 GGTGAGGCGGACC 2156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595180562814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |