Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq658 719 0.0
>seq658
Length=7804
Score = 719 bits (796), Expect = 0.0
Identities = 566/665 (85%), Gaps = 16/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1024 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 965
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 905
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 904 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 845
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | |||| ||| || || ||| | |||||||||||| |
Sbjct 844 ATGACCAGACTTGGGCTTGGTTGATCATCCTGGGTTCTC-CCTGGTGCACTCTTC-CAGT 787
Query 262 TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
||||||||||||||| ||| |||| ||||||| || ||||||||||| |||| |
Sbjct 786 TCAGGCCAGCATCAGTTCGCTGCGG-GGGATAAAAGCTTTGGGAATGTGGCTCCCT--CG 730
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCT 379
|| |||||||||||| | ||| | || || | |||||||||| ||||| | ||
Sbjct 729 GGAGTGTTATAGCCCATTGCATAATAC--CCTGCTCCGGACTGAGGTTCGCGCATCTGCA 672
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 671 AGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 613
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| |||||| |||||| | ||||||||||||||||||| ||||| |
Sbjct 612 TTCGTATGCGAGTGTTCGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 553
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 552 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 497
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 496 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 437
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 436 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 377
Query 679 GGCGA 683
|||||
Sbjct 376 GGCGA 372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079971257000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |