Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq658 250 4e-64
>seq658
Length=7804
Score = 250 bits (276), Expect = 4e-64
Identities = 228/279 (82%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 6092 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6035
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6034 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5975
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | ||||||| | ||| ||| | ||||||||| |||| |
Sbjct 5974 GAACGCGGTGATAC-CACCTGCACGT-ATAGATGGACAAGAATAGGCTCCGGCTTAGTGT 5917
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | || ||| ||||||||| ||| | | | ||| ||||
Sbjct 5916 CTTAGCAGGC--GATTCTTCCGCGGCGCAGGAAGCGCGTCGCGGT-ATTTCGCGAATTGT 5860
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || | |||||| ||||||||||||||||||
Sbjct 5859 AATTTCAACACGAGCAGGGTCAAATCCTTTGCAGACGAC 5821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819189365760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |