Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq101 127 5e-27 >seq101 Length=49074 Score = 127 bits (140), Expect = 5e-27 Identities = 199/279 (71%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| |||||| ||| |||||||||||||| | |||||||| Sbjct 22002 TAAACTGTATCTGCACAGCTATTCTAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 22061 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 22062 ATCGTTCAATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 22121 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGAT---CAAGAGCTTCGCGT-TAGC 182 || | | |||||||||||| || ||||||| ||| | || || | || | | Sbjct 22122 CCCTCA-CGTTACGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAGATATTAGTATCTC 22180 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-T 241 ||| ||| |||||| ||| |||||||||| | |||||| |||||| | | || | Sbjct 22181 TAATTATATCTGTTAACCAGCCGTCACCGGGCAGACATCACACTCTATACTTAGATTTCT 22240 Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | ||| ||| ||||||||||||| | ||| |||||| Sbjct 22241 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAGCAGTCG 22279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260793771648