Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq273 260 4e-67 >seq273 Length=1143 Score = 260 bits (288), Expect = 4e-67 Identities = 223/269 (83%), Gaps = 11/269 (4%) Strand=Plus/Minus Query 244 GGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA----AGG--GCGTT 297 |||| |||||| ||| |||||| |||||||| | | ||| || || |||| Sbjct 1143 GGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GCAGCAACGGGCAGAGCCCGCGTC 1086 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||||| Sbjct 1085 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 1026 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||| |||||||||| |||| | | ||| |||||| |||| |||||||||||| Sbjct 1025 CTAGAATTACTACGGTTATCCGAGTAGCA-GATACCATCAAACAAACTATAACTGATTTA 967 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAAT 475 ||||||||||||||||||||| || | ||| || ||||||| |||||||||||||||| Sbjct 966 ATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAAT 907 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 906 CTTTGAGACAAGCATATGACTACTGGCAG 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392538624