Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4 271 6e-68
seq12 125 6e-24
>seq4
Length=2550084
Score = 271 bits (300), Expect = 6e-68
Identities = 1223/1906 (64%), Gaps = 68/1906 (4%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| || || || || | |||||| |||| ||| | || ||||||||||||||
Sbjct 817885 ATCGACAGTAAATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 817826
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| ||| ||| | ||| ||||| | || |||| |||| | | || |
Sbjct 817825 CTTGAGACCAAGCTTCCAGCCGGTGAAGTGCAT-GCTGGTAATCTTGCCCATGGTGGGGT 817767
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | |||||| || || ||| | || || || |||||||
Sbjct 817766 CTTTCATGTGGATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCA 817707
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TCA 65314
| | | || | || || |||||||| ||||||||||| || | | || | ||
Sbjct 817706 TCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA-GCCTTAACATCC 817648
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372
|| || | |||| ||||| || || | | | ||||| || | || ||
Sbjct 817647 GCGGGGATGTTGGGGATGTTCTGGATGGAGCC--GTCTTCAGCAATGATTCTGTTTTTCA 817590
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA--ACCAAGTGACGATTGATGA 65429
| | || ||||| | |||| || | |||| |||| | | || | |||| |
Sbjct 817589 TAGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGG---TTGACAA 817533
Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489
| ||||||||||||| || |||||||| ||||||||||| ||| || || |||
Sbjct 817532 CCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGC 817473
Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549
| || |||| || || || || | ||| ||||| |||||||| || | | ||
Sbjct 817472 ACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGAC 817413
Query 65550 AGTTTCGCAATCCGT--TCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TC 65605
||| || | |||| || || || | | || | ||||||| ||| | ||
Sbjct 817412 TGTTGCGGATACCGTGCTCCTTGACCTGCTCT--CGGAGCGGCTCCCAGTCCCAGAGCTC 817355
Query 65606 GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT 65665
|| | || | |||| |||||| || || ||| | || | ||| ||
Sbjct 817354 GG---AAGGT-----TTCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGA 817303
Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAG 65724
|| || ||| | ||| ||||||||||||||||| || || | | || |
Sbjct 817302 GAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCTGCACGGACGCAGTCAAA 817243
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784
|| || ||| || ||||| || || || || || ||||| |||||| | |||
Sbjct 817242 -GCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTC 817184
Query 65785 GTACGGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841
| ||||| | | || ||| | | || || ||||| || || || | ||||||
Sbjct 817183 AAAAGGCATGCGGA---GGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGAT 817127
Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901
|||||| || |||| ||| | |||||||| |||||||| | |||| ||| ||
Sbjct 817126 GGGACGGTGGCGCATGTTGCTGTTGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAAT 817067
Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCG--CAATTGTTCGAAATC 65958
|| |||| ||||| || ||| | | || | ||| ||| | || ||| ||
Sbjct 817066 GATCTTGTTCAGGTTGCGG---ACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTC 817010
Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018
| || | |||| || | | | || || || ||||| || || ||
Sbjct 817009 ATAA---------CAATCGT---TGTTGTAGTCAACGAATGAAGGCAGGGCCAGCGAGGC 816962
Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078
||||||||||| || | || ||||| ||| | || |||| ||||| |||||||| ||
Sbjct 816961 AAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCACAGGTT 816902
Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG-CATGCATCCTTGT 66137
|| ||| || ||||| | |||| || || |||||||| ||| |||| ||||||||
Sbjct 816901 GGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATG-ATCCTTGT 816843
Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197
| | |||| | || | || |||||| || | |||| || |||| ||| ||
Sbjct 816842 AAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGCTTCT 816783
Query 66198 GTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCG--TAATGTTCGTAGAGGTGTT 66254
| ||||||| || | | | |||| ||| || ||| || | || || | | |
Sbjct 816782 GGGCCTTCATGGT-CTTGCGACCCTTACCG--GCCTTCTCATACTTCTCATACAAGGCCT 816726
Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314
| || || || | |||| || | || |||| | || ||||| || | ||
Sbjct 816725 CAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCC 816666
Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374
| ||||| | || || ||||| ||| || |||||||| ||||| || ||| ||| |
Sbjct 816665 AGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACA 816606
Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434
||| || ||||| ||| || | ||||| || ||||| | |||||||||||| ||||
Sbjct 816605 AATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGA 816546
Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494
||||| ||||| || || |||||||||||||| | || || ||| |||||| |
Sbjct 816545 CATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCT 816486
Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554
|||| ||||| ||||| |||||||||||||| | ||| || || || || ||
Sbjct 816485 GGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGG 816426
Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614
| |||||||| ||| | ||| || || ||| || || ||| || || ||||| |
Sbjct 816425 TACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTTGAGACCGA 816366
Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTC 66672
| ||||| ||| |||| ||||| ||||| || | | || | | || || ||
Sbjct 816365 TGCCACCAGCCATCTTGGAGATCATGGCACA--CGTCTTGAGGGTGTCGTAGATACCCTC 816308
Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732
|||| ||| |||| ||| | | | |||||||| || ||||| | || || |
Sbjct 816307 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACC 816248
Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792
|| |||||||||||| | ||||| ||||| | | |||||| ||||| ||
Sbjct 816247 AGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAGGTTGTAGGT 816188
Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGT 66851
||||| |||| || |||| || || || || | | ||| ||||| | | ||
Sbjct 816187 CTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGACA-CGCATGATCATGT 816129
Query 66852 ATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911
|| || || ||||| | | | | ||| | | | ||| || || ||||| ||||
Sbjct 816128 GCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACGATCGCTCCAGAGTCT 816069
Query 66912 TGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957
||| || |||||| ||| ||||| || ||| ||||||||
Sbjct 816068 TGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGC 816023
>seq12
Length=1358207
Score = 125 bits (138), Expect = 6e-24
Identities = 234/336 (70%), Gaps = 11/336 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| || || || |||||||| | ||||| | ||| |
Sbjct 113698 ATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTGCTGAGGAAATTGATCTT 113757
Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201
||||| || || |||||||| | || | || || | | | | || |
Sbjct 113758 TCCAAGGATTTGCATGACTGGAACAACCGCCTGAATGCAGACGAGCAGTTCTTTGTTTCC 113817
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|||| | ||| | |||||||||||||| || || |||||||| ||||| | | || |
Sbjct 113818 CACAT-TCTTG-CTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGC 113875
Query 61262 G-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| |||| | || | || | ||||||| ||||||||||| |||||||||||
Sbjct 113876 GATTTAGCGCTGAAGTT-CAGATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATG 113934
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| ||||||| |||| ||| | | |||||||| || ||||||| |||||
Sbjct 113935 ATGGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATACATCAAGGAGCCT 113994
Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGAC 61415
| | || | | || ||||||||||||| || ||
Sbjct 113995 TCCCAGCG-CACCTATCTGTTCAATGCCATTGAAAC 114029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565606392160
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