Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 271 6e-68 seq12 125 6e-24 >seq4 Length=2550084 Score = 271 bits (300), Expect = 6e-68 Identities = 1223/1906 (64%), Gaps = 68/1906 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| || || || || | |||||| |||| ||| | || |||||||||||||| Sbjct 817885 ATCGACAGTAAATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 817826 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| | ||| ||||| | || |||| |||| | | || | Sbjct 817825 CTTGAGACCAAGCTTCCAGCCGGTGAAGTGCAT-GCTGGTAATCTTGCCCATGGTGGGGT 817767 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | |||||| || || ||| | || || || ||||||| Sbjct 817766 CTTTCATGTGGATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCA 817707 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TCA 65314 | | | || | || || |||||||| ||||||||||| || | | || | || Sbjct 817706 TCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA-GCCTTAACATCC 817648 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372 || || | |||| ||||| || || | | | ||||| || | || || Sbjct 817647 GCGGGGATGTTGGGGATGTTCTGGATGGAGCC--GTCTTCAGCAATGATTCTGTTTTTCA 817590 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA--ACCAAGTGACGATTGATGA 65429 | | || ||||| | |||| || | |||| |||| | | || | |||| | Sbjct 817589 TAGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGG---TTGACAA 817533 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | ||||||||||||| || |||||||| ||||||||||| ||| || || ||| Sbjct 817532 CCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGC 817473 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || |||| || || || || | ||| ||||| |||||||| || | | || Sbjct 817472 ACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGAC 817413 Query 65550 AGTTTCGCAATCCGT--TCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TC 65605 ||| || | |||| || || || | | || | ||||||| ||| | || Sbjct 817412 TGTTGCGGATACCGTGCTCCTTGACCTGCTCT--CGGAGCGGCTCCCAGTCCCAGAGCTC 817355 Query 65606 GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT 65665 || | || | |||| |||||| || || ||| | || | ||| || Sbjct 817354 GG---AAGGT-----TTCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGA 817303 Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAG 65724 || || ||| | ||| ||||||||||||||||| || || | | || | Sbjct 817302 GAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCTGCACGGACGCAGTCAAA 817243 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 || || ||| || ||||| || || || || || ||||| |||||| | ||| Sbjct 817242 -GCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTC 817184 Query 65785 GTACGGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841 | ||||| | | || ||| | | || || ||||| || || || | |||||| Sbjct 817183 AAAAGGCATGCGGA---GGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGAT 817127 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 |||||| || |||| ||| | |||||||| |||||||| | |||| ||| || Sbjct 817126 GGGACGGTGGCGCATGTTGCTGTTGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAAT 817067 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCG--CAATTGTTCGAAATC 65958 || |||| ||||| || ||| | | || | ||| ||| | || ||| || Sbjct 817066 GATCTTGTTCAGGTTGCGG---ACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTC 817010 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 | || | |||| || | | | || || || ||||| || || || Sbjct 817009 ATAA---------CAATCGT---TGTTGTAGTCAACGAATGAAGGCAGGGCCAGCGAGGC 816962 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 ||||||||||| || | || ||||| ||| | || |||| ||||| |||||||| || Sbjct 816961 AAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCACAGGTT 816902 Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG-CATGCATCCTTGT 66137 || ||| || ||||| | |||| || || |||||||| ||| |||| |||||||| Sbjct 816901 GGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATG-ATCCTTGT 816843 Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197 | | |||| | || | || |||||| || | |||| || |||| ||| || Sbjct 816842 AAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGCTTCT 816783 Query 66198 GTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCG--TAATGTTCGTAGAGGTGTT 66254 | ||||||| || | | | |||| ||| || ||| || | || || | | | Sbjct 816782 GGGCCTTCATGGT-CTTGCGACCCTTACCG--GCCTTCTCATACTTCTCATACAAGGCCT 816726 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314 | || || || | |||| || | || |||| | || ||||| || | || Sbjct 816725 CAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCC 816666 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 | ||||| | || || ||||| ||| || |||||||| ||||| || ||| ||| | Sbjct 816665 AGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACA 816606 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 ||| || ||||| ||| || | ||||| || ||||| | |||||||||||| |||| Sbjct 816605 AATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGA 816546 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 ||||| ||||| || || |||||||||||||| | || || ||| |||||| | Sbjct 816545 CATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCT 816486 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 |||| ||||| ||||| |||||||||||||| | ||| || || || || || Sbjct 816485 GGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGG 816426 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | |||||||| ||| | ||| || || ||| || || ||| || || ||||| | Sbjct 816425 TACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTTGAGACCGA 816366 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTC 66672 | ||||| ||| |||| ||||| ||||| || | | || | | || || || Sbjct 816365 TGCCACCAGCCATCTTGGAGATCATGGCACA--CGTCTTGAGGGTGTCGTAGATACCCTC 816308 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 |||| ||| |||| ||| | | | |||||||| || ||||| | || || | Sbjct 816307 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACC 816248 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 || |||||||||||| | ||||| ||||| | | |||||| ||||| || Sbjct 816247 AGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAGGTTGTAGGT 816188 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGT 66851 ||||| |||| || |||| || || || || | | ||| ||||| | | || Sbjct 816187 CTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGACA-CGCATGATCATGT 816129 Query 66852 ATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911 || || || ||||| | | | | ||| | | | ||| || || ||||| |||| Sbjct 816128 GCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACGATCGCTCCAGAGTCT 816069 Query 66912 TGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 ||| || |||||| ||| ||||| || ||| |||||||| Sbjct 816068 TGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGC 816023 >seq12 Length=1358207 Score = 125 bits (138), Expect = 6e-24 Identities = 234/336 (70%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| || || || |||||||| | ||||| | ||| | Sbjct 113698 ATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTGCTGAGGAAATTGATCTT 113757 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 ||||| || || |||||||| | || | || || | | | | || | Sbjct 113758 TCCAAGGATTTGCATGACTGGAACAACCGCCTGAATGCAGACGAGCAGTTCTTTGTTTCC 113817 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 |||| | ||| | |||||||||||||| || || |||||||| ||||| | | || | Sbjct 113818 CACAT-TCTTG-CTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGC 113875 Query 61262 G-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| |||| | || | || | ||||||| ||||||||||| ||||||||||| Sbjct 113876 GATTTAGCGCTGAAGTT-CAGATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATG 113934 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| ||| | | |||||||| || ||||||| ||||| Sbjct 113935 ATGGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATACATCAAGGAGCCT 113994 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGAC 61415 | | || | | || ||||||||||||| || || Sbjct 113995 TCCCAGCG-CACCTATCTGTTCAATGCCATTGAAAC 114029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565606392160