Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq63 104 9e-17
seq12 86.0 2e-11
>seq63
Length=192606
Score = 104 bits (114), Expect = 9e-17
Identities = 112/146 (77%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||| ||||||||||||| | ||||||||||||||||||||||| | ||| |
Sbjct 17121 CAATGGTCATTCGAGAGGGAATGGCGTGAGGGTTGATGATGATGTCAGGCGTTACGCCTT 17180
Query 364485 CAGCGGTAAAGGGCATATCTT-CGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
| | || |||||||||| | | || | | | | ||| ||||| |||||||| |
Sbjct 17181 CTCTCGAGAAAGGCATATCTTCCTGTCGGTAAG-TTACACCGATGGTACCCTTTTGTCCG 17239
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| ||||| ||||||||||| |||||
Sbjct 17240 TGACGAGAGGCAAACTTGTCACCAAT 17265
>seq12
Length=1358207
Score = 86.0 bits (94), Expect = 2e-11
Identities = 147/210 (70%), Gaps = 14/210 (7%)
Strand=Plus/Minus
Query 159449 TCTGGATACTGGTAAGGACCGTAGACATTGTTACAACGGGTGATGATTACGGGAAGAGAG 159508
||||||||||||| |||||||||||||||||||| || |||||| | |||||| |
Sbjct 325942 TCTGGATACTGGTGAGGACCGTAGACATTGTTACTGCGCACGATGATGATGGGAAGCTTG 325883
Query 159509 AAGGAGAGACGATAAGAACTG-GCCAAGAGTTCTGCTCCTGCCTTGCTGGCCGCATAAGG 159567
||| |||||| |||| ||| | || ||| | |||||||| || ||||||||
Sbjct 325882 AAGCTTTTTTGATAAG-ACTGAACCAGCATCTCAGCTGCCGCCTTGCTTGCTGCATAAGG 325824
Query 159568 GTTAGT--GGGC-ATGAAGATGGAATCGATACTAACGTCATCGT---------TCTCTCC 159615
||| || |||| | || | ||| |||| | | | |||| || |||| ||
Sbjct 325823 GTTTGTTGGGGCGAGGATGCTGGTTTCGAGAGCATCTTCATTGTCGGAATTAATCTCACC 325764
Query 159616 CTTAACCTCATCTGTAGAGACGTGAATGAA 159645
| |||||||| || |||| ||| || ||
Sbjct 325763 GTAGACCTCATCCGTCGAGATGTGGATAAA 325734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884874469847142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |