Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq177 273 3e-71 seq113 172 8e-41 >seq177 Length=65289 Score = 273 bits (302), Expect = 3e-71 Identities = 201/229 (88%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 63492 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 63435 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 63434 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 63375 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| |||| |||| |||| | | |||||||| | | ||||||||||||||||||| Sbjct 63374 ACCCAAACCTTTCGGTTAAGGAAAAA-ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 63316 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63315 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 63267 >seq113 Length=576732 Score = 172 bits (190), Expect = 8e-41 Identities = 166/208 (80%), Gaps = 14/208 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 513972 GTACAAAGAGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 513915 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| ||| || ||||||| ||||||| | ||||| | | ||||| Sbjct 513914 CTCGTTGAAGAGCAATAACTGCAATGCCCTATCCCAA-CACGACGGA--------GATTA 513864 Query 121 CCCGGA-CCTGTCGGCCAAGGTGATAGA--CTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||| | ||| |||| | || || | | || |||| | | ||||||||||||||||| Sbjct 513863 CCCAAAACCTTTCGGTTAGGGGGAAAAAAGCTTGTTGGCTCCGTCAGTGTAGCGCGCGTG 513804 Query 178 CGGCCCAGAACATCTAAGGGCATCACAG 205 | |||||||||||||||||||||||||| Sbjct 513803 CAGCCCAGAACATCTAAGGGCATCACAG 513776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996146235