Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27]
529 sequences; 69,308,136 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq177 273 3e-71
seq113 172 8e-41
>seq177
Length=65289
Score = 273 bits (302), Expect = 3e-71
Identities = 201/229 (88%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| |
Sbjct 63492 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 63435
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 63434 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 63375
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| |||| |||| | | |||||||| | | |||||||||||||||||||
Sbjct 63374 ACCCAAACCTTTCGGTTAAGGAAAAA-ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 63316
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63315 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 63267
>seq113
Length=576732
Score = 172 bits (190), Expect = 8e-41
Identities = 166/208 (80%), Gaps = 14/208 (7%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| ||||||||||| ||| ||| |||| ||||||| |||||||||||||||| |
Sbjct 513972 GTACAAAGAGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 513915
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||| ||| || ||||||| ||||||| | ||||| | | |||||
Sbjct 513914 CTCGTTGAAGAGCAATAACTGCAATGCCCTATCCCAA-CACGACGGA--------GATTA 513864
Query 121 CCCGGA-CCTGTCGGCCAAGGTGATAGA--CTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||| | ||| |||| | || || | | || |||| | | |||||||||||||||||
Sbjct 513863 CCCAAAACCTTTCGGTTAGGGGGAAAAAAGCTTGTTGGCTCCGTCAGTGTAGCGCGCGTG 513804
Query 178 CGGCCCAGAACATCTAAGGGCATCACAG 205
| ||||||||||||||||||||||||||
Sbjct 513803 CAGCCCAGAACATCTAAGGGCATCACAG 513776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996146235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |