Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27]
529 sequences; 69,308,136 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq237 107 5e-21
>seq237
Length=35670
Score = 107 bits (118), Expect = 5e-21
Identities = 195/282 (69%), Gaps = 10/282 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 24581 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 24522
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 24521 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 24462
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179
|| | || | || ||||||| || | ||||| ||| |||| ||||| ||
Sbjct 24461 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAAACCAAGCTTATATTAGTC 24402
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| || | ||| |||||| ||| || ||||||| |||||| | |||| | | |
Sbjct 24401 AACTTAGAAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 24342
Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | || ||||||||||| |||||| | ||||||||||
Sbjct 24341 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 24300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260793330368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |