Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27]
529 sequences; 69,308,136 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq177 96.9 2e-18
seq517 75.2 7e-12
>seq177
Length=65289
Score = 96.9 bits (106), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| | ||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 63541 TCCGAAAGC-CTCACTTAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 63485
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| || ||||||||
Sbjct 63484 GGCAGGGACGTAAT-CAGCGCAAGCT 63460
>seq517
Length=261423
Score = 75.2 bits (82), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| | ||||| || ||||| ||| ||||||||||| |||||||||||||||| |||
Sbjct 243032 CTCACTTAACCATT-CAATCGGTTGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGCACG 243089
Query 109 TAATACAACGCAAGC 123
|| | ||||| ||||
Sbjct 243090 TACT-CAACGTAAGC 243103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300798508220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |