Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27]
529 sequences; 69,308,136 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq177 172 7e-41
>seq177
Length=65289
Score = 172 bits (190), Expect = 7e-41
Identities = 172/215 (80%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 62375 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 62316
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||| ||||| || ||
Sbjct 62315 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCCACA 62256
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182
|| ||| |||| ||||| ||| || | | ||| | ||| ||| |||| | |||
Sbjct 62255 CACCCAGTGAAGGGCAT-GGGGTTCCCTAGAAGGAAAGGCCCGGTCGGACCAGTGCACGC 62197
Query 183 CGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
|||||||||||| | || ||| |||| || |||
Sbjct 62196 GGTGAGGCGGACC-GACCAACCAGGCCCAAGGTTC 62163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196949786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |