Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq177 172 7e-41 >seq177 Length=65289 Score = 172 bits (190), Expect = 7e-41 Identities = 172/215 (80%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 62375 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 62316 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||| ||||| || || Sbjct 62315 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCCACA 62256 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182 || ||| |||| ||||| ||| || | | ||| | ||| ||| |||| | ||| Sbjct 62255 CACCCAGTGAAGGGCAT-GGGGTTCCCTAGAAGGAAAGGCCCGGTCGGACCAGTGCACGC 62197 Query 183 CGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 |||||||||||| | || ||| |||| || ||| Sbjct 62196 GGTGAGGCGGACC-GACCAACCAGGCCCAAGGTTC 62163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196949786