Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27]
529 sequences; 69,308,136 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq177 277 3e-72
>seq177
Length=65289
Score = 277 bits (306), Expect = 3e-72
Identities = 232/279 (83%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 55919 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 55976
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 55977 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 56036
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||||| || |||| ||||| ||||||||||||||||||||||||| | | ||||| | |
Sbjct 56037 GAACGCGGCGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCCTTGGCCCTGCA 56096
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
||||||| || |||||| ||| |||| ||| | ||||| || ||||
Sbjct 56097 CCTTAGCTGGTTGGCAACACTATCACCGTTGAAG-TCGGTGGTAGTAGCTGACGTCTTGC 56155
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||||||| || ||| | |||||| |||||
Sbjct 56156 AATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 56194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195801856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |