Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq76 297 2e-75 seq101 102 6e-17 >seq76 Length=131010 Score = 297 bits (328), Expect = 2e-75 Identities = 751/1134 (66%), Gaps = 26/1134 (2%) Strand=Plus/Plus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 || || ||||||||||| || | | | || || | ||||| |||||| ||| ||| Sbjct 90821 TCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAATTGCTCTTTCTTGCC 90880 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTC-ACCACATG 65931 ||||| || |||||||| |||| ||||||||| ||||| || | || | || || || Sbjct 90881 TCAGGAACTGGGTAGTAGTTGACATCGATAATCTTGTTCAAGTT-CTTGACGACAACTTG 90939 Query 65932 CACGATACGTCGCAATTGTTC--GAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGAC 65989 || | ||| | ||| ||||||| || || || ||| Sbjct 90940 GCAGA--CCTCGTGAAGCTTCTGGAAATCATAA-GT-----------GGCAGTCTTCTCG 90985 Query 65990 ACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049 | ||| | | || || ||||| || || | ||||| ||| | ||| || || || Sbjct 90986 TCGACATATGTTGGGAGAGCAAGCGACGCCAAATTGCAACAAGCGACCTCATCTGGTGCA 91045 Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 ||||||||||| || ||||||| || || || ||||| || | ||||| ||| Sbjct 91046 CAGTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGG 91105 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| || ||||| ||||||||||| | |||| | || | ||||||||| ||| Sbjct 91106 TTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTTTGA 91165 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | ||||| || | || |||||| | || || | | | | | |||| | | Sbjct 91166 GCCTCAAGAATAGAGTACCAAAGCTTTTGGGCTTTGATGCT-CTTGCGACCCTTGCCCTC 91224 Query 66230 CGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 | ||||| | || || | |||||| ||||| | || |||| || || || Sbjct 91225 AGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACATCGGCCAAACCAGG 91284 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 ||||| || || ||||||| | ||| || | || ||| ||||| ||| || || Sbjct 91285 ACACTCGTTAGGGCACATCAATGTCCAGTCGAGGTTCTTTTCAACACGCTTCATGAAGAG 91344 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||| || |||||||| ||||| |||||||| || || || |||||| | ||||| || Sbjct 91345 ATCTGGAATCCAGAGAGCGTAAAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTT 91404 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || || | |||||||||||| || | ||||| |||||||| || |||||||||||||| Sbjct 91405 CTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAAGGTAGATGGCGAA 91464 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 | || ||| ||| |||||||| || || || | ||| ||||| || || | Sbjct 91465 AGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGTTAAAAACTCT 91524 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 | ||| || |||| ||||| || || || ||||| ||| | || | || || Sbjct 91525 GAGCATAGGAACGATTCCGTTGGAGTTTCCGTTGGTACCGGCAATATAAGCACCAGTAGC 91584 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || |||||| || ||||| |||||||| || |||| || || ||||||| Sbjct 91585 ACGGATTCTGTGAACGTTGAGACCGATACCACCAGCGTTCTTTGAAATCATAGCACAAAT 91644 Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT---GGTCAGGAGGTAGCA 66705 || ||| | | || || |||||| ||| |||| || | |||||| | || | Sbjct 91645 CTTCAATGTGTCGTAAATACCATCAATGCTGTCCTCCTTCATGTCGATCAGGAAGCAGGA 91704 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 ||| |||||| | | ||||| | || | ||| |||||||| | ||||| || || Sbjct 91705 TGA---AAGTTGTGCCTGTGGTGTACCAGCTGCGAAAAGGGTGGGGGAGGCGTGGGTGAA 91761 Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825 ||| | || ||||| | ||||| ||||||||| |||| || || | || || || || Sbjct 91762 GTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCACCGTGTAT 91821 Query 66826 CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATG 66885 || | ||| ||||| | | | ||| || || ||| | | | | || | | Sbjct 91822 TCCCACCGCAACACGCATAATCATATGTTGTGGACGCTCGCAGATCTTGCCATCGAGACG 91881 Query 66886 CATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | || || || || |||||||||| ||| ||||| ||| |||||||| Sbjct 91882 GAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAATC 91935 >seq101 Length=586485 Score = 102 bits (112), Expect = 6e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || |||||| | || |||||||| || || ||| | ||||| ||||||||||| ||||| Sbjct 137993 GTTGAGGGTATCTTCTTCAGTGGCTCTTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGC 138052 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||| | ||||| |||||| ||| |||||||| || || |||||||| |||| Sbjct 138053 CTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTCCCGTGACGAGGGTCTGCA 138108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565436804560