Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq373 691 0.0 seq364 691 0.0 >seq373 Length=8978 Score = 691 bits (766), Expect = 0.0 Identities = 553/659 (84%), Gaps = 9/659 (1%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct 4431 GAAACTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAATTTC 4490 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 4491 TTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 4550 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 ||||||| ||| |||||| |||||| || |||||||||||||||||||||||||| ||| Sbjct 4551 AAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCCTGCG 4610 Query 206 ACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGGTCA 264 |||||||| || | | | | || ||||| ||| |||||||||||| | | | | Sbjct 4611 ACCAGACTCGCGCCCCGCGGACCAGCCGGCGTTCTC-GCCGGTGCACTCCGCGGGGTGCG 4669 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||| | | | | ||| ||||||| |||||| || | | ||||| ||| | Sbjct 4670 GGCCAGCATCGGTTTTCCCTGGGGGAGAAAGGCCGCGGGAACGTAG-CTCCTTC-GGGAG 4727 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384 |||||||||||| || | |||| || | |||| |||| ||||||| |||| ||||| Sbjct 4728 TGTTATAGCCCGTGGCGTCATGC-CCCAGGGGGGACCGAGGACCGCGCTTCGGCAAGGAT 4786 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||||||||||| || ||| ||||||||| |||||||||||||||||| | ||| Sbjct 4787 GCTGGCGTAATGGTCGTCGGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAGCATTGG 4846 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 |||||||| |||||| |||||||| |||| |||||||||||||| ||||| || | Sbjct 4847 GGCGAGTGTCTGGGTGCCAAACCCGCACGCGAAATGAAAGTGAACGCAGGTGAGA----G 4902 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 || ||| || ||||||||||||||||| |||||||||||||||||||||| | Sbjct 4903 CTTCGGCGCATCACCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCCCCACC 4962 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 4963 GCTTGGACCCGAAAGATGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGG 5022 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||| Sbjct 5023 TGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 5081 >seq364 Length=9211 Score = 691 bits (766), Expect = 0.0 Identities = 553/659 (84%), Gaps = 9/659 (1%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct 4431 GAAACTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTAAATTTC 4490 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 4491 TTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 4550 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 ||||||| ||| |||||| |||||| || |||||||||||||||||||||||||| ||| Sbjct 4551 AAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCCTGCG 4610 Query 206 ACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGGTCA 264 |||||||| || | | | | || ||||| ||| |||||||||||| | | | | Sbjct 4611 ACCAGACTCGCGCCCCGCGGACCAGCCGGCGTTCTC-GCCGGTGCACTCCGCGGGGTGCG 4669 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||| | | | | ||| ||||||| |||||| || | | ||||| ||| | Sbjct 4670 GGCCAGCATCGGTTTTCCCTGGGGGAGAAAGGCCGCGGGAACGTAG-CTCCTTC-GGGAG 4727 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384 |||||||||||| || | |||| || | |||| |||| ||||||| |||| ||||| Sbjct 4728 TGTTATAGCCCGTGGCGTCATGC-CCCAGGGGGGACCGAGGACCGCGCTTCGGCAAGGAT 4786 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||||||||||| || ||| ||||||||| |||||||||||||||||| | ||| Sbjct 4787 GCTGGCGTAATGGTCGTCGGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAGCATTGG 4846 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 |||||||| |||||| |||||||| |||| |||||||||||||| ||||| || | Sbjct 4847 GGCGAGTGTCTGGGTGCCAAACCCGCACGCGAAATGAAAGTGAACGCAGGTGAGA----G 4902 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 || ||| || ||||||||||||||||| |||||||||||||||||||||| | Sbjct 4903 CTTCGGCGCATCACCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCCCCACC 4962 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 4963 GCTTGGACCCGAAAGATGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGG 5022 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||| Sbjct 5023 TGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 5081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079980609200