Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq373 336 4e-90 seq364 336 4e-90 >seq373 Length=8978 Score = 336 bits (372), Expect = 4e-90 Identities = 199/206 (97%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 7996 TACTAAGCTGAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 7938 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7937 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7878 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7877 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 7818 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 7817 GAACGCTTGGCCGCCACAAGCCAGTT 7792 Score = 165 bits (182), Expect = 1e-38 Identities = 91/91 (100%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7315 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 7256 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||| Sbjct 7255 GATAGGCCACACTTTCATGGTTTGTATTCAC 7225 >seq364 Length=9211 Score = 336 bits (372), Expect = 4e-90 Identities = 199/206 (97%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 7996 TACTAAGCTGAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 7938 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7937 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7878 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7877 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 7818 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 7817 GAACGCTTGGCCGCCACAAGCCAGTT 7792 Score = 165 bits (182), Expect = 1e-38 Identities = 91/91 (100%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7315 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 7256 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||| Sbjct 7255 GATAGGCCACACTTTCATGGTTTGTATTCAC 7225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392276224