Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq81 77.0 4e-12 >seq81 Length=39800 Score = 77.0 bits (84), Expect = 4e-12 Identities = 106/147 (72%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCG-GGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||| ||||| ||| | ||||| | | |||| ||| | || | |||||||||||| Sbjct 1355 GGGTCTTCTCGTCT-ATCTAGAGGTAAACTGTATCTGCACAGTTATTCCAATTTCACTGA 1297 Query 84 GCTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | ||| || ||||||| |||| |||||||||| | | | | ||| | Sbjct 1296 G-TCAATCTTAGAGACAGCTGTTGTATCGTTACATCATTCGTGCAAGACCGCATTTAACG 1238 Query 143 GACAAGGAATTTCGCTACCTTAGGACC 169 | ||||| ||||||||||||||||||| Sbjct 1237 GCCAAGGCATTTCGCTACCTTAGGACC 1211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547195207896