Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq373 181 1e-43 seq364 181 1e-43 >seq373 Length=8978 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 2296 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2237 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || ||||||||||||||||||||||||||| |||| ||||| ||||||||||| | || Sbjct 2236 AGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTCCCCGACA 2177 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| || | ||| | || |||| | ||| Sbjct 2176 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 2118 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 2117 GGTGAGGCGGACC 2105 >seq364 Length=9211 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 2296 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2237 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || ||||||||||||||||||||||||||| |||| ||||| ||||||||||| | || Sbjct 2236 AGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTCCCCGACA 2177 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| || | ||| | || |||| | ||| Sbjct 2176 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 2118 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 2117 GGTGAGGCGGACC 2105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595194787536