Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq373 437 2e-120 seq364 437 2e-120 >seq373 Length=8978 Score = 437 bits (484), Expect = 2e-120 Identities = 283/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | | |||| ||| | ||||||||||||| Sbjct 3132 GAACGAGACCTTAACCTGCTAAATAGCCCGCGCTGCTTCGGCAGCGTGCCGGCTTCTTAG 3191 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3192 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3251 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| ||||||||| |||||| ||||||| | ||||||||| Sbjct 3252 GATGTTCTGGGCCGCACGCGCGTTACACTGACGGAGCCAGCGAGTTCTT--CCTTGGCCG 3309 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 3310 AAAGGCCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3369 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| Sbjct 3370 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAACTTGCGTTGATTACGTCCCTG 3429 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3430 CCCTTTGTA 3438 >seq364 Length=9211 Score = 437 bits (484), Expect = 2e-120 Identities = 283/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | | |||| ||| | ||||||||||||| Sbjct 3132 GAACGAGACCTTAACCTGCTAAATAGCCCGCGCTGCTTCGGCAGCGTGCCGGCTTCTTAG 3191 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3192 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3251 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| ||||||||| |||||| ||||||| | ||||||||| Sbjct 3252 GATGTTCTGGGCCGCACGCGCGTTACACTGACGGAGCCAGCGAGTTCTT--CCTTGGCCG 3309 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 3310 AAAGGCCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3369 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| Sbjct 3370 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAACTTGCGTTGATTACGTCCCTG 3429 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3430 CCCTTTGTA 3438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947191437312