Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq373 260 2e-67 seq364 260 2e-67 >seq373 Length=8978 Score = 260 bits (288), Expect = 2e-67 Identities = 232/280 (83%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 7994 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 8051 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8052 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 8111 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | || | |||| |||| | | || ||||| ||||||||||||||| || | Sbjct 8112 GAACGCGACGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCTTCGGCCTCGTAT 8170 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | || | || |||||||| |||| || | ||| ||||| Sbjct 8171 CTTAGCAGGC--GGTTCCGCCGCCGGGCAGGAAGCGCCCGGCGGTCTTC-CGCGTATTGC 8227 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 |||||| || |||| ||||| |||||||||||||||||| Sbjct 8228 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 8266 >seq364 Length=9211 Score = 260 bits (288), Expect = 2e-67 Identities = 232/280 (83%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 7994 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 8051 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8052 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 8111 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | || | |||| |||| | | || ||||| ||||||||||||||| || | Sbjct 8112 GAACGCGACGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCTTCGGCCTCGTAT 8170 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | || | || |||||||| |||| || | ||| ||||| Sbjct 8171 CTTAGCAGGC--GGTTCCGCCGCCGGGCAGGAAGCGCCCGGCGGTCTTC-CGCGTATTGC 8227 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 |||||| || |||| ||||| |||||||||||||||||| Sbjct 8228 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 8266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192825856