Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq373 747 0.0
seq364 747 0.0
>seq373
Length=8978
Score = 747 bits (828), Expect = 0.0
Identities = 469/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1969 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1910
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1909 CCCCGCGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 1850
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| ||| |||||| | ||||||||||||| |||| ||
Sbjct 1849 TCTCAGGCTCCTTCTCCGGGGCCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 1790
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||| || ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1789 GGCCCAGATCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAGCCATCGCCGGCG 1730
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1729 CAAGGCCGTGCGATTCGACAAGTTATTATGAATCACCAGGGAGCCCCGAAGGGCGTTGGT 1670
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1669 CTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 1610
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1550
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1549 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1491
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 1490 AGACAAGCATATGACTACTGGCAG 1467
>seq364
Length=9211
Score = 747 bits (828), Expect = 0.0
Identities = 469/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1969 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1910
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1909 CCCCGCGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 1850
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| ||| |||||| | ||||||||||||| |||| ||
Sbjct 1849 TCTCAGGCTCCTTCTCCGGGGCCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 1790
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||| || ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1789 GGCCCAGATCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAGCCATCGCCGGCG 1730
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1729 CAAGGCCGTGCGATTCGACAAGTTATTATGAATCACCAGGGAGCCCCGAAGGGCGTTGGT 1670
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1669 CTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 1610
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1550
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1549 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1491
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 1490 AGACAAGCATATGACTACTGGCAG 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510386345984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |