Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq376 457 7e-124
seq1 149 5e-31
>seq376
Length=8930
Score = 457 bits (506), Expect = 7e-124
Identities = 1260/1902 (66%), Gaps = 62/1902 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| |||||||||||||||| | || ||||| | || | || |||||||| ||||||
Sbjct 5103 TCCACCGTGAACTGGATCGGCTGCGCTGCCGCTTGCGTGCGCAGGTAGTACATACCGGTC 5162
Query 65138 TTGAGGCCAGCACGCCAAGCA--TAGAAATGCATCGATGATAATTTTGCATA-ATTCGGC 65194
||||| || || | ||| || |||||||| | || |||| |||| | | ||||
Sbjct 5163 TTGAGTCCCA-ACTTCCAGCCCGTA-AAATGCAT-GCTGGTAATCTTGCCCATAGTCGGT 5219
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGC 65253
|| || || || || | |||||| ||| |||||| |||| ||||| || || ||
Sbjct 5220 GCGCGCATGTGAATGTTGAGCGACTGCGACTGGTCGATG-AACGCGCCACGGTCGGCCGC 5278
Query 65254 CATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-A 65309
||| | |||| | || | ||| |||||||| || ||||||||||| || | | |
Sbjct 5279 CATCTGCACAATCGTGCGCTG---CGAGATCTCCCACACTGTCTTGTACAG-CGCCTTGA 5334
Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369
||| || || | | |||| |||||| || || | |||||| ||||| ||
Sbjct 5335 TTTCAGCCGGGATGTTCGGGATGTTCTGGACCGACCCGCCCTCTGCAATGATGCGGTTCT 5394
Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGA 65426
||| || ||||||| |||| || | || | | ||| | | || | ||||
Sbjct 5395 TCATGTTGTCCGACCACAGGCCCATGTCCACCAGGTCCTTCAGAAGCCA-TG--GGTTGA 5451
Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486
|| ||||||||||| | ||| ||||| || ||||||||||||||| || || |
Sbjct 5452 CCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGA 5511
Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546
|| |||| ||||||| || || || | || ||||| || ||||| || || |||||||
Sbjct 5512 AGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACA 5571
Query 65547 ATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG 65606
||| |||| |||| | | || ||| |||||| |||||||| ||||| |
Sbjct 5572 GACTGTTGCGCACGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCACA--G 5629
Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC--GATACTGGCCGG 65664
|| ||||| | | ||| ||||||||| |||||| | || | || | ||
Sbjct 5630 GTC---CGTCGGCTTG-ACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACG--GG 5683
Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAG 65724
|| || | | | |||||| |||||| ||| || || | || | | ||
Sbjct 5684 AGACCCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAG 5743
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784
|| || || || ||||| || || | || || ||||| ||||| |||
Sbjct 5744 CGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTC 5803
Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844
| ||||| | || | | || | || |||| || || || || | |||||| ||
Sbjct 5804 AAAAGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGG 5863
Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904
|| ||||||| ||| | |||||| || ||||||||||| |||| ||||| ||
Sbjct 5864 CCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGAT 5923
Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAA 65962
|| |||| ||||| |||||| ||| || | ||| | ||| ||| ||
Sbjct 5924 ACGGTTCAGGTTGCGCACCACCACCTGCGTGA--CCTCGTGAAGCTTCTGGAAGTCG--- 5978
Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022
|| | | ||| || || | ||||||| || || || || || | |||
Sbjct 5979 ----TACGTC--TCGT---TGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGG 6029
Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082
||||| || || | ||| || || ||| ||||||| ||| || |||||||| || |
Sbjct 6030 TTGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAG 6089
Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142
| ||| |||||||||| |||| || || |||||||| ||||| |||||||||| |
Sbjct 6090 CTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 6149
Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202
||| |||| |||||||||| || | ||| | || ||| | ||| || | |||
Sbjct 6150 ATGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCC 6209
Query 66203 TTCACCGTACGT-----ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGA 66257
|| ||||| || || ||||| |||| ||||| | ||||| | | ||||
Sbjct 6210 TTGACCGTGCGACGGCCACGGCCCT-CCTTC----TCGTACTTCTCGTACAAGGCCTCGA 6264
Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317
| || || | |||| ||||| || |||| | || |||||||||| ||| |
Sbjct 6265 ACTCGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGT 6324
Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377
| || | || || ||||| ||| || || || || |||||||| || ||| || |
Sbjct 6325 CGCCGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGT 6384
Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437
|||| || ||| |||||| |||| || || ||||||| |||||||||||| || | ||
Sbjct 6385 CGCGGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGT 6444
Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497
| |||||||| || |||||||||||| ||| | ||| || ||| ||||| ||||
Sbjct 6445 CAGCATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGT 6504
Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557
| || ||||| || |||||||| || |||| ||| || || | ||||| ||| | |
Sbjct 6505 CCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTAC 6564
Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617
| ||||||||| | ||| || || || || || ||| || |||| || || |
Sbjct 6565 CGTTGGTGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCCGATGC 6624
Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAAT 66675
|||| |||||||| ||||| ||| ||| || | |||| | | ||||| |||||
Sbjct 6625 CACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC--GTAGATGCCCTCAAT 6682
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
| |||| |||| ||| | ||| |||| || || |||| || ||| ||| | ||
Sbjct 6683 GCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGC 6742
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
||| || ||||| | ||||| || ||| | | | |||||||| |||||||||||
Sbjct 6743 GTTGAAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCTC 6802
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855
| ||| || | ||| ||||| ||||||| || ||||| | | || ||
Sbjct 6803 CAGGACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCATGTGCTG 6862
Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915
||||| || || | | | |||| | | | ||| || || ||||| |||||||
Sbjct 6863 GGGCCGCTCAACGATCTTGCCGTTGAGCTTAAGCAGGTACGAACGCTCCAGCGTCTTGAA 6922
Query 66916 ACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957
|||||||| ||| ||||| ||| ||| ||||||||
Sbjct 6923 GCCAAAGTATTGGTAGTTGAAGTCGCGGTCATAGACGATGGC 6964
>seq1
Length=398088
Score = 149 bits (164), Expect = 5e-31
Identities = 214/297 (72%), Gaps = 11/297 (4%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||||| |||||| ||||| ||
Sbjct 36190 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCTGAGGAGATCGATCTG 36249
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| |||||| | |||||| | || | || || ||| | | ||| | | |
Sbjct 36250 TCCAAGGACATGCACGACTGGAACAACCGCCT---GACCGATGACGAGCGGTTCTTCATA 36306
Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
|| | | || ||||| ||||| ||||| || || ||||| ||||| | | ||
Sbjct 36307 TCCCACATCCTTGCCTTCTTCGCCGCGTCGGATGGCATTGTCAACGAGAACCTGGTCGAG 36366
Query 61261 CGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319
|| ||| || | ||||| || || | ||||| |||||||||||||||||||||||
Sbjct 36367 CGCTTCA-GCGGCGAGGTCCAGGTTCCCGAGGCCCGTTGTTTCTACGGCTTCCAGATCAT 36425
Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|||||||| ||||||| |||| ||| | | |||||||| || ||||||| |||
Sbjct 36426 GATGGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATACATCAAGGA 36482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563619794560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |