Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq376 457 7e-124 seq1 149 5e-31 >seq376 Length=8930 Score = 457 bits (506), Expect = 7e-124 Identities = 1260/1902 (66%), Gaps = 62/1902 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || |||||||||||||||| | || ||||| | || | || |||||||| |||||| Sbjct 5103 TCCACCGTGAACTGGATCGGCTGCGCTGCCGCTTGCGTGCGCAGGTAGTACATACCGGTC 5162 Query 65138 TTGAGGCCAGCACGCCAAGCA--TAGAAATGCATCGATGATAATTTTGCATA-ATTCGGC 65194 ||||| || || | ||| || |||||||| | || |||| |||| | | |||| Sbjct 5163 TTGAGTCCCA-ACTTCCAGCCCGTA-AAATGCAT-GCTGGTAATCTTGCCCATAGTCGGT 5219 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGC 65253 || || || || || | |||||| ||| |||||| |||| ||||| || || || Sbjct 5220 GCGCGCATGTGAATGTTGAGCGACTGCGACTGGTCGATG-AACGCGCCACGGTCGGCCGC 5278 Query 65254 CATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-A 65309 ||| | |||| | || | ||| |||||||| || ||||||||||| || | | | Sbjct 5279 CATCTGCACAATCGTGCGCTG---CGAGATCTCCCACACTGTCTTGTACAG-CGCCTTGA 5334 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 ||| || || | | |||| |||||| || || | |||||| ||||| || Sbjct 5335 TTTCAGCCGGGATGTTCGGGATGTTCTGGACCGACCCGCCCTCTGCAATGATGCGGTTCT 5394 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGA 65426 ||| || ||||||| |||| || | || | | ||| | | || | |||| Sbjct 5395 TCATGTTGTCCGACCACAGGCCCATGTCCACCAGGTCCTTCAGAAGCCA-TG--GGTTGA 5451 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 || ||||||||||| | ||| ||||| || ||||||||||||||| || || | Sbjct 5452 CCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGA 5511 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 || |||| ||||||| || || || | || ||||| || ||||| || || ||||||| Sbjct 5512 AGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACA 5571 Query 65547 ATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG 65606 ||| |||| |||| | | || ||| |||||| |||||||| ||||| | Sbjct 5572 GACTGTTGCGCACGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCACA--G 5629 Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC--GATACTGGCCGG 65664 || ||||| | | ||| ||||||||| |||||| | || | || | || Sbjct 5630 GTC---CGTCGGCTTG-ACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACG--GG 5683 Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAG 65724 || || | | | |||||| |||||| ||| || || | || | | || Sbjct 5684 AGACCCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAG 5743 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 || || || || ||||| || || | || || ||||| ||||| ||| Sbjct 5744 CGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTC 5803 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | ||||| | || | | || | || |||| || || || || | |||||| || Sbjct 5804 AAAAGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGG 5863 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 || ||||||| ||| | |||||| || ||||||||||| |||| ||||| || Sbjct 5864 CCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGAT 5923 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAA 65962 || |||| ||||| |||||| ||| || | ||| | ||| ||| || Sbjct 5924 ACGGTTCAGGTTGCGCACCACCACCTGCGTGA--CCTCGTGAAGCTTCTGGAAGTCG--- 5978 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 || | | ||| || || | ||||||| || || || || || | ||| Sbjct 5979 ----TACGTC--TCGT---TGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGG 6029 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || || | ||| || || ||| ||||||| ||| || |||||||| || | Sbjct 6030 TTGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAG 6089 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||| |||||||||| |||| || || |||||||| ||||| |||||||||| | Sbjct 6090 CTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 6149 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||| |||| |||||||||| || | ||| | || ||| | ||| || | ||| Sbjct 6150 ATGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCC 6209 Query 66203 TTCACCGTACGT-----ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGA 66257 || ||||| || || ||||| |||| ||||| | ||||| | | |||| Sbjct 6210 TTGACCGTGCGACGGCCACGGCCCT-CCTTC----TCGTACTTCTCGTACAAGGCCTCGA 6264 Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 | || || | |||| ||||| || |||| | || |||||||||| ||| | Sbjct 6265 ACTCGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGT 6324 Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | || | || || ||||| ||| || || || || |||||||| || ||| || | Sbjct 6325 CGCCGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGT 6384 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 |||| || ||| |||||| |||| || || ||||||| |||||||||||| || | || Sbjct 6385 CGCGGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGT 6444 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 | |||||||| || |||||||||||| ||| | ||| || ||| ||||| |||| Sbjct 6445 CAGCATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGT 6504 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 | || ||||| || |||||||| || |||| ||| || || | ||||| ||| | | Sbjct 6505 CCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTAC 6564 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 | ||||||||| | ||| || || || || || ||| || |||| || || | Sbjct 6565 CGTTGGTGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCCGATGC 6624 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAAT 66675 |||| |||||||| ||||| ||| ||| || | |||| | | ||||| ||||| Sbjct 6625 CACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC--GTAGATGCCCTCAAT 6682 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 | |||| |||| ||| | ||| |||| || || |||| || ||| ||| | || Sbjct 6683 GCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGC 6742 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795 ||| || ||||| | ||||| || ||| | | | |||||||| ||||||||||| Sbjct 6743 GTTGAAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCTC 6802 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855 | ||| || | ||| ||||| ||||||| || ||||| | | || || Sbjct 6803 CAGGACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCATGTGCTG 6862 Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915 ||||| || || | | | |||| | | | ||| || || ||||| ||||||| Sbjct 6863 GGGCCGCTCAACGATCTTGCCGTTGAGCTTAAGCAGGTACGAACGCTCCAGCGTCTTGAA 6922 Query 66916 ACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 |||||||| ||| ||||| ||| ||| |||||||| Sbjct 6923 GCCAAAGTATTGGTAGTTGAAGTCGCGGTCATAGACGATGGC 6964 >seq1 Length=398088 Score = 149 bits (164), Expect = 5e-31 Identities = 214/297 (72%), Gaps = 11/297 (4%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| ||||| || Sbjct 36190 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCTGAGGAGATCGATCTG 36249 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| |||||| | |||||| | || | || || ||| | | ||| | | | Sbjct 36250 TCCAAGGACATGCACGACTGGAACAACCGCCT---GACCGATGACGAGCGGTTCTTCATA 36306 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| ||||| ||||| || || ||||| ||||| | | || Sbjct 36307 TCCCACATCCTTGCCTTCTTCGCCGCGTCGGATGGCATTGTCAACGAGAACCTGGTCGAG 36366 Query 61261 CGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| || | ||||| || || | ||||| ||||||||||||||||||||||| Sbjct 36367 CGCTTCA-GCGGCGAGGTCCAGGTTCCCGAGGCCCGTTGTTTCTACGGCTTCCAGATCAT 36425 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| ||||||| |||| ||| | | |||||||| || ||||||| ||| Sbjct 36426 GATGGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATACATCAAGGA 36482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563619794560