Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq896 86.0 2e-11 >seq896 Length=67886 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| || || || |||| | | ||||||||||||||||| ||| ||||| | Sbjct 56306 CAATCGTCATGCGCGACGGGATGGCGTGCGGGTTGATGATGATGTCCGGCGTGATGCCCT 56365 Query 364485 CAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | | || || ||||| | || || || ||| | | |||||| || ||||| || | Sbjct 56366 CCGTCGTGAACGGCATGTCCTCCGACCGGTACG-TCACACCAATCGTACCCTTCTGTCCG 56424 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||||||||| Sbjct 56425 TGCCGCGACGCAAACTTGTCGCCAAT 56450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884864568303272