Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq381 639 0.0 >seq381 Length=7755 Score = 639 bits (708), Expect = 0.0 Identities = 545/662 (82%), Gaps = 20/662 (3%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||| Sbjct 5992 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 5933 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 5932 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 5873 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 5872 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 5813 Query 208 CAGACTTGCCCG---CAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263 |||||||| | ||||| | |||| | | | ||||| | | | Sbjct 5812 CAGACTTGTCTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 5758 Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||| |||||| | | | ||| ||| |||||| ||||||||||| || |||||| Sbjct 5757 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGCTTAGGGAATGTGGCTCC-TTCGGG 5701 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | ||||||||||| | ||| | || | | ||||||| ||||||| |||| || Sbjct 5700 AG-TGTTATAGCCCTTTGCATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAG 5643 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | | Sbjct 5642 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 5583 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 ||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || | Sbjct 5582 ATATGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGC 5523 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || ||| ||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 5522 TTC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 5467 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 | | |||||||||||| |||||||||||| || |||||||||||||||||||||||| Sbjct 5466 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 5407 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||||||||||||||||||||| ||||||||||||||||||||| || | || ||||| Sbjct 5406 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 5347 Query 682 GA 683 || Sbjct 5346 GA 5345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079986186200