Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq381 639 0.0
>seq381
Length=7755
Score = 639 bits (708), Expect = 0.0
Identities = 545/662 (82%), Gaps = 20/662 (3%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 5992 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 5933
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 5932 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 5873
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 5872 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 5813
Query 208 CAGACTTGCCCG---CAGTTGCTCAACCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTC 263
|||||||| | ||||| | |||| | | | ||||| | | |
Sbjct 5812 CAGACTTGTCTCTATCAGTTTTGGTAGTTT----TCGGACTGCTTTACTCTGTTA-GTAC 5758
Query 264 AGGCCAGCATCAGCTCG--GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||| |||||| | | | ||| ||| |||||| ||||||||||| || ||||||
Sbjct 5757 AGGCCAACATCAGTTTGTTGTCGG--GGAGAAAGGCTTAGGGAATGTGGCTCC-TTCGGG 5701
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||| | ||| | || | | ||||||| ||||||| |||| ||
Sbjct 5700 AG-TGTTATAGCCCTTTGCATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAG 5643
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
|||| |||||||||||| | |||| ||||||||| |||||||||||||||||| | | |
Sbjct 5642 GATGTTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAACCTT 5583
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||||| |||||| |||||||||||| ||||||| ||||| || |
Sbjct 5582 ATATGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAACGTGAACGTAGGTGAGAGC 5523
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| ||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 5522 TTC----GGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGTAAGAGCATA 5467
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
| | |||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct 5466 TAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGGAAACTC 5407
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| ||||||||||||||||||||| || | || |||||
Sbjct 5406 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCATGGGGGC 5347
Query 682 GA 683
||
Sbjct 5346 GA 5345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079986186200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |