Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq381 419 4e-115 >seq381 Length=7755 Score = 419 bits (464), Expect = 4e-115 Identities = 279/309 (90%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 7179 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 7120 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7119 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7060 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| |||||||||| ||||| ||||| | ||||| | | Sbjct 7059 GATGTTCTGGGCCGCACGCGCGTTACACTGACACAGCCAGCGAGT--CTTTCCTTGACAG 7002 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 | ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7001 AGATGTCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 6942 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 6941 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 6882 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 6881 CCCTTTGTA 6873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193900032