Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq116 302 4e-77 >seq116 Length=85249 Score = 302 bits (334), Expect = 4e-77 Identities = 645/957 (67%), Gaps = 20/957 (2%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| ||| || || | || || |||||||| ||||| | ||| |||||||| | Sbjct 69214 ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAA 69155 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| ||| || |||||||| || || ||| ||||| |||| ||||| || || Sbjct 69154 TACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTG 69095 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| || ||||| |||||||||| |||| | || | |||||||| ||||| | Sbjct 69094 CTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCC 69035 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 || | ||||| | ||| || | ||||| | || | || ||| | ||| | Sbjct 69034 TCCAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTTAG-ACGGCCACGACCCTCCTT 68976 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGG 66288 ||| || | ||||| || ||||| |||| | || || || | ||| | || Sbjct 68975 TTCATACTTCTCGTACAGAGCCTCGAA---TTCATCGCCGTAGCAGTCAGCCAGGCCAGG 68919 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 |||| || || |||||||| | ||| ||||||| || || | ||| ||| || || Sbjct 68918 GCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAG 68859 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 |||||| ||||| || || ||| ||||| || || || |||||| |||||||||| Sbjct 68858 ATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATT 68799 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||| | |||||||||||||| | ||| |||||||| || || || || || || || Sbjct 68798 CTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAA 68739 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 | || ||| ||| |||||| ||||| || || || || |||||||||||||| Sbjct 68738 AGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACG 68679 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 | ||| || |||| |||||||| | || ||||| || ||||| || || || Sbjct 68678 GAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGC 68619 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || ||| |||||| || || ||||||||||| ||| |||| || || ||||||| Sbjct 68618 ACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGT 68559 Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 || || | || || |||||| |||| |||| ||| | ||| |||| || Sbjct 68558 CTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGA 68499 Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 | || || | | ||| || | || ||| || ||||| | || || || ||| | Sbjct 68498 AGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAA 68439 Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 | || ||||||| ||||| ||||| | ||| || | || || || || || Sbjct 68438 CTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCACCCCAAACGCC 68379 Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCA- 66887 | ||| ||||| | | || || || || || || | |||| || | Sbjct 68378 AACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAAC------AATCTTGCCATCAAG 68325 Query 66888 -TTAAG----TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||||| ||||| || ||||||||||||| ||||||||| || |||||||| Sbjct 68324 CTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATC 68268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564879588160