Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq116 302 4e-77
>seq116
Length=85249
Score = 302 bits (334), Expect = 4e-77
Identities = 645/957 (67%), Gaps = 20/957 (2%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
|||||| ||| || || | || || |||||||| ||||| | ||| |||||||| |
Sbjct 69214 ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAA 69155
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||||| ||| || |||||||| || || ||| ||||| |||| ||||| || ||
Sbjct 69154 TACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTG 69095
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
||||| || ||||| |||||||||| |||| | || | |||||||| ||||| |
Sbjct 69094 CTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCC 69035
Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231
|| | ||||| | ||| || | ||||| | || | || ||| | ||| |
Sbjct 69034 TCCAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTTAG-ACGGCCACGACCCTCCTT 68976
Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGG 66288
||| || | ||||| || ||||| |||| | || || || | ||| | ||
Sbjct 68975 TTCATACTTCTCGTACAGAGCCTCGAA---TTCATCGCCGTAGCAGTCAGCCAGGCCAGG 68919
Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348
|||| || || |||||||| | ||| ||||||| || || | ||| ||| || ||
Sbjct 68918 GCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAG 68859
Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408
|||||| ||||| || || ||| ||||| || || || |||||| ||||||||||
Sbjct 68858 ATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATT 68799
Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468
||||| | |||||||||||||| | ||| |||||||| || || || || || || ||
Sbjct 68798 CTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAA 68739
Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528
| || ||| ||| |||||| ||||| || || || || ||||||||||||||
Sbjct 68738 AGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACG 68679
Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588
| ||| || |||| |||||||| | || ||||| || ||||| || || ||
Sbjct 68678 GAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGC 68619
Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648
|| ||| |||||| || || ||||||||||| ||| |||| || || |||||||
Sbjct 68618 ACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGT 68559
Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708
|| || | || || |||||| |||| |||| ||| | ||| |||| ||
Sbjct 68558 CTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGA 68499
Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768
| || || | | ||| || | || ||| || ||||| | || || || ||| |
Sbjct 68498 AGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAA 68439
Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
| || ||||||| ||||| ||||| | ||| || | || || || || ||
Sbjct 68438 CTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCACCCCAAACGCC 68379
Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCA- 66887
| ||| ||||| | | || || || || || || | |||| || |
Sbjct 68378 AACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAAC------AATCTTGCCATCAAG 68325
Query 66888 -TTAAG----TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
||||| ||||| || ||||||||||||| ||||||||| || ||||||||
Sbjct 68324 CTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATC 68268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564879588160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |