Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq539 237 1e-57
seq431 179 3e-40
>seq539
Length=40911
Score = 237 bits (262), Expect = 1e-57
Identities = 631/961 (66%), Gaps = 10/961 (1%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|||||||| |||||||| |||||||| ||||| | ||||||||| || |||||||| |
Sbjct 17064 GGAAGGGCCAGAGATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATA 17123
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| || |||||||| || || ||| ||||| || | ||| | ||||| ||||||||
Sbjct 17124 ATCTCAGTGCACAGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGATTGCTCTTGCGG 17183
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| || ||||| | |||| | || |||| |||||| |||| ||| | |||
Sbjct 17184 TTGCAATGGTCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATG 17243
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCAC---CGTACGTACCGC--CCTACCTTTGCGTTCGT 66236
|| | ||| || | ||||| || ||| || ||||| || |||| ||||
Sbjct 17244 GCATACCACAGCTTCTGGGCCTTGACAACCGTGCG-ACCGCGACCCTCCTTC----TCGT 17298
Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296
| | ||| || || || || ||| || | || | || | || || | |
Sbjct 17299 ACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCAT 17358
Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356
|| ||||| || | ||| || ||| | || ||||| ||| || | || |
Sbjct 17359 TGGGGCACATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAACAAGTCGCAGA 17418
Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416
|||| ||||| |||| || || || || || || || | ||||| || |||||||
Sbjct 17419 TCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGCA 17478
Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476
||||||||||||| |||| || ||||||||||| || ||||| ||||| || | ||
Sbjct 17479 AGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCCAG 17538
Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536
|| ||| ||||| ||||| || || || || |||||||| ||||| | ||| |
Sbjct 17539 GTCGCTTGTTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGG 17598
Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596
| |||| ||||| || | || || || || | ||| || || || || |||
Sbjct 17599 GAACGATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAAGAGCCAGTGGCACGAATAC 17658
Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTG 66656
||| ||||| ||||| ||||| || ||| |||| || || |||||| | |
Sbjct 17659 GGTGGACATTGAGACCGATACCGCCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGG 17718
Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716
| | | ||||| || ||| |||| | || ||| | ||| |||| ||| | |
Sbjct 17719 TATCGTAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGCACGAAGACAACT 17778
Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776
| | | ||| || | || ||||| || |||| ||||| || ||| | | || |
Sbjct 17779 GAGCCTGGGGGGTACCAGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTGG 17838
Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836
|||| | ||||| || || | ||| || | || || || ||| || | |||
Sbjct 17839 ACATAAAGTTGTAGGTTTCAAGCACACGTTCGACTTTGTCACCCCAAATACCCACAGCAA 17898
Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896
||||| | | || || || ||||| || | | | | | || | || || ||| |
Sbjct 17899 CACGCATTATCATGTGCTGGGGACGTTCAACAATCTTACCATCGAGTTTCAGTAGGTAAG 17958
Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGG 66956
| || || || ||||| | ||||||||| ||| ||||| || | | | ||||||||
Sbjct 17959 AACGCTCAAGAGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGATCGTACACGATGG 18018
Query 66957 C 66957
|
Sbjct 18019 C 18019
>seq431
Length=155802
Score = 179 bits (198), Expect = 3e-40
Identities = 557/852 (65%), Gaps = 14/852 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || |||||||||||||| | || ||| | ||| |
Sbjct 43634 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAAGAGATTGATCTC 43693
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | ||| | | | || | || || | |||||
Sbjct 43694 TCCAAGGATCTCCACGACTGGAACAACCGTCTGAACAAG-GACGAGCAGTACTTCATCTC 43752
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || |||||||| || || || || |||||||| || || | | || ||
Sbjct 43753 CCACATTCTCGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAACCTCGTTGAGCG 43812
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| | |||||||| | | ||||| || || |||||||| |||||||| ||
Sbjct 43813 CTTCTCAGGCGAGGTGCAGATTCCCGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGAT 43872
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
||| || |||| || || | || | || || || || ||||||| ||||| |
Sbjct 43873 GGAAAACATCCATTCTGAAACCTATTCGCTGCTAATTGACACCTACATCAAGGAGCCCTC 43932
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
| | || | | ||||||||||| || || || || | || || || ||
Sbjct 43933 GCAGCGCACATACCTATTCAATGCCATTGACACTATTCCCTGCATCCGTCGCAAGGCCGA 43992
Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGATTGCTGGCA 61500
||||| | || ||||||||| |||| | |||| |||| | || | | ||
Sbjct 43993 CTGGGCTCTGAAGTGGATCACCG--ACAAGGAGTCTACGTTTGCCCAGCGCCTAGTTGCC 44050
Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560
||||| | |||||||| | |||||| || | || ||| | ||||| ||| ||
Sbjct 44051 TTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTCTGGCTGCGC 44110
Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620
|| ||||| || ||||| |||||||||||| || ||| | || || || |||||||||
Sbjct 44111 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGTGACGAGGGC 44170
Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680
|||| || |||||| |||| ||| ||| | || || || || ||
Sbjct 44171 CTGCACACCGACTTTGCTTGCCTGCTGTTC--TCGC-ACCTAAACAACCGCCCCAGCAAG 44227
Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740
|| | ||| |||| | ||| || || ||||| |||| || ||||| ||
Sbjct 44228 GACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGATCGAGAAGGAGTTCCTGACCGAG 44287
Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800
||| | ||| | || | || ||||| | || ||| |||||| ||||| |||
Sbjct 44288 GCTCTTCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTACATTGAGTTT 44347
Query 61801 GTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCC 61859
||||| ||||| ||| | || | | | || | ||| || | || | | | ||||||
Sbjct 44348 GTTGCGGACCGCCTGCTTGTTGCTCTAGGCAACGAAAAGG-TGTACCGTGCCACAAACCC 44406
Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919
|| || |||||||| | || ||||| | |||||||| || || || ||||| |||||
Sbjct 44407 CTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGT 44466
Query 61920 AGGCGACTATCA 61931
|| || || ||
Sbjct 44467 CGGTGATTACCA 44478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397561192269200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |