Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq60 425 1e-116 >seq60 Length=8097 Score = 425 bits (470), Expect = 1e-116 Identities = 285/317 (90%), Gaps = 1/317 (0%) Strand=Plus/Plus Query 2 ACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGG 61 ||| | |||||||||| |||||| |||| ||| ||||||||||||||||||||||| ||| Sbjct 2967 ACTGGTTCCGGCCGGGTCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGTCGG 3026 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 ||| |||||||||||||||||||||||||||||| || | |||||||| |||||||||| Sbjct 3027 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 3086 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 3087 GTACAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGC 3146 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct 3147 CGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCT 3206 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| | ||||||||||||||||||||||| || ||||||||||||||||| || || Sbjct 3207 TGGATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG 3266 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 3267 -GAACGAAAGTTAGGGG 3282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191223232