Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq60 767 0.0 >seq60 Length=8097 Score = 767 bits (850), Expect = 0.0 Identities = 494/537 (92%), Gaps = 7/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 7304 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 7245 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 7244 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 7185 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||||| |||||| ||| | | ||| |||| |||||| ||| Sbjct 7184 GGCCCGCGAAGGACCTTAACACCAGAAGTTGGACAG--AAGTCCAGCCCCGCTTA--TGA 7129 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct 7128 ATAAGTAAAAAAACAATAAGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 7072 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 |||||||||||| | ||| |||||| | ||| ||||||||||||||||||||||||||| Sbjct 7071 TTCTACACCTCTTATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 7012 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7011 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATA 6952 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 6951 GGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 6892 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 6891 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTCCA 6832 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 6831 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 6775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635184318432