Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2 228 8e-58 >seq2 Length=187415 Score = 228 bits (252), Expect = 8e-58 Identities = 163/186 (88%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 182399 GGAAATAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 182458 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 182459 GTACAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 182517 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct 182518 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTC 182577 Query 181 TTGGAT 186 |||||| Sbjct 182578 TTGGAT 182583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993765280