Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq103 425 1e-116
>seq103
Length=46166
Score = 425 bits (470), Expect = 1e-116
Identities = 285/317 (90%), Gaps = 1/317 (0%)
Strand=Plus/Plus
Query 2 ACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGG 61
||| | |||||||||| |||||| |||| ||| ||||||||||||||||||||||| |||
Sbjct 12986 ACTGGTTCCGGCCGGGTCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGTCGG 13045
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121
||| |||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct 13046 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 13105
Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 13106 GTACAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGC 13165
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241
|||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct 13166 CGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCT 13225
Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
||||| | ||||||||||||||||||||||| || ||||||||||||||||| || ||
Sbjct 13226 TGGATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG 13285
Query 302 TGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 13286 -GAACGAAAGTTAGGGG 13301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915192559424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |