Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq103 664 0.0
>seq103
Length=46166
Score = 664 bits (736), Expect = 0.0
Identities = 554/669 (83%), Gaps = 24/669 (4%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 14942 AGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 15001
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 15002 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 15061
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 15062 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 15121
Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-C 263
|||||||| | |||||| | | |||| ||| | | |||| | | | || |
Sbjct 15122 CAGACTTGTTTCTGGCAGTTTCGTTA---GCCCTCGGGCTGATTTACTC-TGTCCAGTAC 15177
Query 264 AGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGG---CCCCCTTC 318
||||||||||||| | | | ||| ||| |||||| | ||||| || | ||||||||
Sbjct 15178 AGGCCAGCATCAGTTTGCTGTCGG--GGAGAAAGGCTCTGGGAACGTAGCTCCCCCCTTC 15235
Query 319 ----GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC 374
|||| |||||||||||| | ||| | || | |||||||| |||||||
Sbjct 15236 TGGGGGGGAGTGTTATAGCCCTCTGCATAATACCCTTCGGC-AGACTGAGGACCGCGCTT 15294
Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434
|||| ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||
Sbjct 15295 CGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGT 15354
Query 435 CTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494
| | | | | ||||||||||||||||| |||||| |||||||||||||||||||| |||
Sbjct 15355 CAACCTTATGTGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAAAGTGAACGTAGG 15414
Query 495 TGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554
|| || | || ||| ||||||||||| ||||||| |||||||||||||||||||
Sbjct 15415 TGAGA----GCTTCGGCGCATCATCGACCGATTCTGATGTTTTCGGATGGATTTGAGTAA 15470
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | | | |||||||||||| |||||||||||| || |||||||||||||||||
Sbjct 15471 GAGCACACAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAG 15530
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | |
Sbjct 15531 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCA 15590
Query 675 TAGGGGCGA 683
| |||||||
Sbjct 15591 TGGGGGCGA 15599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079982561150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |