Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq103 356 4e-96 >seq103 Length=46166 Score = 356 bits (394), Expect = 4e-96 Identities = 236/258 (91%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 13803 ACTCGCTGGCTGTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 13744 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 13743 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCG 13685 Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| || | || |||||||||||||||||||||||||||||||||||| ||||| Sbjct 13684 TACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 13626 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 13625 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGA 13566 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 13565 AAGAGCTCTCAATCTGTC 13548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796793724453