Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq103 423 4e-116
>seq103
Length=46166
Score = 423 bits (468), Expect = 4e-116
Identities = 280/309 (91%), Gaps = 1/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 13639 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 13698
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13699 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 13758
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| |||||||||| ||||| |||||| | ||||| | |
Sbjct 13759 GATGTTCTGGGCCGCACGCGCGTTACACTGACACAGCCAGCGAGTTTCT-TCCTTGACAG 13817
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 13818 AGATGTCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 13877
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 13878 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 13937
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 13938 CCCTTTGTA 13946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947192299264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |