Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq103 700 0.0
>seq103
Length=46166
Score = 700 bits (776), Expect = 0.0
Identities = 460/504 (91%), Gaps = 3/504 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 12831 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 12772
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct 12771 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATT 12712
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 12711 TCTCAGGCTCCCTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGA 12652
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| || | | | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 12651 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 12592
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||| |||||||||| || | |||||| ||| |||||
Sbjct 12591 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACC-AGAAAGCCCGAA-GGCATTGGT 12534
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 12533 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 12474
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||
Sbjct 12473 AATTACCACGGTTATCCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGA 12414
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 12413 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 12355
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 12354 AGACAAGCATATGACTACTGGCAG 12331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510387720448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |