Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq298 89.7 2e-12 >seq298 Length=22882 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| |||||||| || || || | | | ||||| |||||||| |||||| ||||| | Sbjct 1847 CAATGGTCATACGCGAAGGGATAGCGTGGGGGTTAATGATGATATCAGGCGTGATGCCCT 1906 Query 364485 CAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | |||||| ||||| || || || || | | | | |||||| || |||||||| | Sbjct 1907 CGCGGGTAAATGGCATGTCCTCTTGGCGGTATG-TCACACCAATTGTACCCTTTTGACCG 1965 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||||||||| Sbjct 1966 TGACGGGATGCAAACTTGTCGCCAAT 1991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884866765963009