Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq116 217 1e-51 seq105 212 5e-50 seq3 82.4 6e-11 >seq116 Length=83673 Score = 217 bits (240), Expect = 1e-51 Identities = 616/943 (65%), Gaps = 10/943 (1%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||| |||||||| |||||||| ||||| | ||| ||||| || ||||||| | Sbjct 76168 GGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATA 76227 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || |||||||| || | ||| ||||| || | ||| | ||||| |||||||| Sbjct 76228 ATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGG 76287 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || ||||| | ||| | || |||| |||||| || | ||| | ||| Sbjct 76288 TTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATG 76347 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCAC---CGTACGTACCGC--CCTACCTTTGCGTTCGT 66236 || | ||| || | ||||| || | | || ||||| || |||| |||| Sbjct 76348 GCATACCACAGTTTCTGGGCCTTGACAACCATGCG-ACCGCGACCCTCCTTC----TCGT 76402 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296 | | ||| || || || || ||| || | || | || | || || | | Sbjct 76403 ACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCAT 76462 Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356 || ||||| || | ||| || ||| || || ||||| ||| || | || | Sbjct 76463 TGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGA 76522 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||| ||||| |||| || || || || || || || | ||||| || ||||| | Sbjct 76523 TCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTA 76582 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||||||||||| |||| || ||||||||||| || || || ||||| || | || Sbjct 76583 AGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAG 76642 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 || ||| ||||| ||||| || || || ||| |||||||| ||||| | ||| | Sbjct 76643 GTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGG 76702 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | |||| ||||| || | || || ||||| | ||| || || || || ||| Sbjct 76703 GAACGATGCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATAC 76762 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTG 66656 ||||||||| ||||| |||||||| ||| |||| || || |||||| | | Sbjct 76763 GGTGAACATTGAGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGG 76822 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 | | | ||||| || ||| |||| |||| ||| | ||| | |||||| | | Sbjct 76823 TATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACT 76882 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 | | | ||| || |||| ||||| || |||| ||||| || ||| | | || || Sbjct 76883 GAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAG 76942 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836 |||| ||||| || || | ||| ||| | || || || ||| || | ||| Sbjct 76943 ACATAAGGTTGTAGGTTTCAAGCACACGATCGACTTTGTCACCCCAAATACCCACAGCAA 77002 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896 ||||| | | || || || || || || | | | | | | | | || ||| | Sbjct 77003 CACGCATTATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACG 77062 Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | || || || ||||| | ||||||||| ||| ||||| || Sbjct 77063 AACGCTCGAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTC 77105 >seq105 Length=86313 Score = 212 bits (234), Expect = 5e-50 Identities = 560/850 (66%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| | ||| || Sbjct 44053 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 44112 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 || || || | | |||||| | ||| | | | || || | ||||| Sbjct 44113 TCTAAGGATCTCCACGACTGGAACAACCGTCTGAACAAAGACGAGCAGTACTTCATCTCC 44172 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || |||||||| || || || || |||||||| || ||| | | || || Sbjct 44173 CACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCGC 44232 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | |||||||| | | ||||| || || |||||||| |||||||| ||| Sbjct 44233 TTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 44292 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 || || ||||||| || | ||| | || || || || ||||||| ||||| || Sbjct 44293 GAAAACATCCACTCTGAAACCTACTCGCTGCTGATTGACACCTACATCAAGGAGCCCTCG 44352 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 | || | ||||||||||||| || || || || | || || || || Sbjct 44353 CAGCGCACATACCTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCGAC 44412 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCTGGCAT 61501 ||||| | || ||||||||| |||| | | || |||| | || | | || | Sbjct 44413 TGGGCTCTGAAGTGGATCACCG--ACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCCT 44470 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| | |||||||| | |||||| || | || ||| | ||||| ||| | | Sbjct 44471 TTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTCCGCA 44530 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | ||||| || ||||| |||||||||||| || ||| | || || || || |||||| Sbjct 44531 AGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGGGCC 44590 Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGG 61681 |||| || |||||| |||| ||| ||| ||||| || || || ||| Sbjct 44591 TGCACACCGACTTTGCTTGCCTGCTGTTC--TCGC-ATCTGAACAACCGCCCCAGCAAGG 44647 Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741 | | |||| |||| | ||| || || ||||| |||| || ||||| || | Sbjct 44648 ACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGG 44707 Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801 || ||||| | || | || ||||| || || ||| |||||| ||||| |||| Sbjct 44708 CTCTGCCCTGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTG 44767 Query 61802 TTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCAT 61861 |||| ||||| ||| | || | | | || | || | | || | | | |||||| | Sbjct 44768 TTGCTGACCGCCTGCTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCT 44827 Query 61862 TTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAG 61921 | || |||||||| | || ||||| | |||||||| || || || ||||| ||||| | Sbjct 44828 TCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGTCG 44887 Query 61922 GCGACTATCA 61931 ||||||| || Sbjct 44888 GCGACTACCA 44897 >seq3 Length=270739 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 9159 TACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATACGGACTATACG 9218 ||||| || |||||||| |||||||| || ||| | ||| | || ||||||||| Sbjct 145349 TACGGCTTTCAGTGGCGCCATTTCGGAGCCGAGTATGTGGATGCCAAGACAGACTATACG 145408 Query 9219 GGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATGAGCCGAGTA-- 9276 || |||||||| |||||| |||| || || || || | ||| | | || ||| Sbjct 145409 GGTCAAGGTGTTGATCAGCTGGCTGAAGTCATCCA-CAAACTCAAGACCAACC-CGTACG 145466 Query 9277 GTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATGGTATTGCCGC 9336 ||| || || |||||||| || ||||| || |||||| | ||||||| |||| | Sbjct 145467 ATCGGCGTATCATTATGACCGCTTGGAACCCTGCGGATTTGAAGAAGATGGCGCTGCCAC 145526 Query 9337 CATGCCATATG 9347 | ||||| ||| Sbjct 145527 CGTGCCACATG 145537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563251547200