Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq495 259 7e-67 seq1096 80.6 4e-13 >seq495 Length=8336 Score = 259 bits (286), Expect = 7e-67 Identities = 198/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 5789 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 5846 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 5847 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACACAGTTTAACAAGATT 5906 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||| | || | ||||| | | ||||| || | |||||||| |||||||||| Sbjct 5907 ACCCGGACATCTCTGTCAAGGA-AGAAACTCGCTGGCTGTGTCAGTGTAACGCGCGTGCG 5965 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5966 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6014 >seq1096 Length=509 Score = 80.6 bits (88), Expect = 4e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 160 ATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||| |||||| || |||| |||| |||||||| ||||||||||||||||||||||||| Sbjct 201 ATCATTGTAGCACGTGTGCAGCCCGGAACATCTGAGGGCATCACAGACCTGTTATTGCC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751991163295