Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq495 259 7e-67
seq1096 80.6 4e-13
>seq495
Length=8336
Score = 259 bits (286), Expect = 7e-67
Identities = 198/229 (86%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 5789 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 5846
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 5847 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACACAGTTTAACAAGATT 5906
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||| | || | ||||| | | ||||| || | |||||||| ||||||||||
Sbjct 5907 ACCCGGACATCTCTGTCAAGGA-AGAAACTCGCTGGCTGTGTCAGTGTAACGCGCGTGCG 5965
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5966 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6014
>seq1096
Length=509
Score = 80.6 bits (88), Expect = 4e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 160 ATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218
|||| |||||| || |||| |||| |||||||| |||||||||||||||||||||||||
Sbjct 201 ATCATTGTAGCACGTGTGCAGCCCGGAACATCTGAGGGCATCACAGACCTGTTATTGCC 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751991163295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |