Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq495 425 1e-116
>seq495
Length=8336
Score = 425 bits (470), Expect = 1e-116
Identities = 285/317 (90%), Gaps = 1/317 (0%)
Strand=Plus/Minus
Query 2 ACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGG 61
||| | |||||||||| |||||| |||| ||| ||||||||||||||||||||||| |||
Sbjct 6751 ACTGGTTCCGGCCGGGTCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGTCGG 6692
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121
||| |||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct 6691 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 6632
Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 6631 GTACAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGC 6572
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241
|||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct 6571 CGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCT 6512
Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
||||| | ||||||||||||||||||||||| || ||||||||||||||||| || ||
Sbjct 6511 TGGATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG 6452
Query 302 TGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 6451 -GAACGAAAGTTAGGGG 6436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915188898624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |