Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq495 663 0.0 >seq495 Length=8336 Score = 663 bits (734), Expect = 0.0 Identities = 553/668 (83%), Gaps = 23/668 (3%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || |||| Sbjct 4838 AGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 4779 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4778 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 4719 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 4718 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 4659 Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-C 263 |||||||| | |||||| | | ||| ||| | | ||||| | | || | Sbjct 4658 CAGACTTGTTTCTGGCAGTTTCGTTA---GCCTTCGGGCTGATTTACTCTG-TCCAGTAC 4603 Query 264 AGGCCAGCATCAGCTCGGGCGGTCGG--ATAAAGGCCCCGGGAATGTGGC---CCCCTTC 318 ||||||||||||| | | | ||||| | |||||| | ||||| || || ||||||| Sbjct 4602 AGGCCAGCATCAGTTTG--CTGTCGGGGAGAAAGGCTCTGGGAACGTAGCTCCCCCCTTC 4545 Query 319 GGGGGG---TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 ||||| ||||||||||| | ||| | || | | ||||||| ||||||| | Sbjct 4544 TGGGGGGAGTGTTATAGCCCTCTGCATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTC 4486 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 ||| ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| Sbjct 4485 GGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC 4426 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 | | | | ||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct 4425 AACCTTATGTGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAAAGTGAACGTAGGT 4366 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | || | || ||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct 4365 GAGAGCTTC----GGCGCATCATCGACCGATTCTGATGTTTTCGGATGGATTTGAGTAAG 4310 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||| | | | |||||||||||| |||||||||||| || |||||||||||||||||| Sbjct 4309 AGCACACAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGG 4250 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||||||||||||||||||| ||||||||||||||||||||| || | || Sbjct 4249 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCAT 4190 Query 676 AGGGGCGA 683 ||||||| Sbjct 4189 GGGGGCGA 4182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079973981150