Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq495 663 0.0
>seq495
Length=8336
Score = 663 bits (734), Expect = 0.0
Identities = 553/668 (83%), Gaps = 23/668 (3%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || ||||
Sbjct 4838 AGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTT 4779
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 4778 CTAAAGCTAAATATAGGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 4719
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 4718 AGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGAC 4659
Query 208 CAGACTTG---CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-C 263
|||||||| | |||||| | | ||| ||| | | ||||| | | || |
Sbjct 4658 CAGACTTGTTTCTGGCAGTTTCGTTA---GCCTTCGGGCTGATTTACTCTG-TCCAGTAC 4603
Query 264 AGGCCAGCATCAGCTCGGGCGGTCGG--ATAAAGGCCCCGGGAATGTGGC---CCCCTTC 318
||||||||||||| | | | ||||| | |||||| | ||||| || || |||||||
Sbjct 4602 AGGCCAGCATCAGTTTG--CTGTCGGGGAGAAAGGCTCTGGGAACGTAGCTCCCCCCTTC 4545
Query 319 GGGGGG---TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375
||||| ||||||||||| | ||| | || | | ||||||| ||||||| |
Sbjct 4544 TGGGGGGAGTGTTATAGCCCTCTGCATAATACCCTTCGGCAG-ACTGAGGACCGCGCTTC 4486
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
||| ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||
Sbjct 4485 GGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC 4426
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
| | | | ||||||||||||||||| |||||| |||||||||||||||||||| ||||
Sbjct 4425 AACCTTATGTGCGAGTGTTTGGGTGTAAAACCCCAGCGCGTAATGAAAGTGAACGTAGGT 4366
Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555
| || | || ||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct 4365 GAGAGCTTC----GGCGCATCATCGACCGATTCTGATGTTTTCGGATGGATTTGAGTAAG 4310
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||| | | | |||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct 4309 AGCACACAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAGAGG 4250
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 4249 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAGCAT 4190
Query 676 AGGGGCGA 683
|||||||
Sbjct 4189 GGGGGCGA 4182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079973981150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |