Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq532 87.8 2e-15 >seq532 Length=9364 Score = 87.8 bits (96), Expect = 2e-15 Identities = 164/239 (69%), Gaps = 13/239 (5%) Strand=Plus/Minus Query 11 CATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGT 70 || ||| ||||||||||||| | |||||||| ||||| | || ||| | ||||||| Sbjct 8714 CAGCACTGGGCAGGCGTCAGAACCTATACATCATCTTACGAT-TTGGCAGGTCCCTGTGT 8656 Query 71 TTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTT 130 |||| ||||||||||| | | || | ||| || || || | ||| Sbjct 8655 TTTTGATAAACAGTCGCGATCACCAGTTTTGTGCCACTTACA-------AA----TGGTT 8607 Query 131 CACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189 ||| ||| || ||||||||||||||||| |||||||||| ||||||||| Sbjct 8606 GCCCAAAAGTAAGCCTTTCTTCTCCCGAAGTTACGAAAGTATTTTGCCGAGTTCCTTAAC 8547 Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || | | | |||||||||||||||||| |||| | ||| |||| ||||| Sbjct 8546 TATCTTTATCTCAAGAGCCTTAGTATTCTCTACCCATCCACTAGAGTCAGTTTGCGGTA 8488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694391840149