Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq532 87.8 2e-15
>seq532
Length=9364
Score = 87.8 bits (96), Expect = 2e-15
Identities = 164/239 (69%), Gaps = 13/239 (5%)
Strand=Plus/Minus
Query 11 CATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGT 70
|| ||| ||||||||||||| | |||||||| ||||| | || ||| | |||||||
Sbjct 8714 CAGCACTGGGCAGGCGTCAGAACCTATACATCATCTTACGAT-TTGGCAGGTCCCTGTGT 8656
Query 71 TTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTT 130
|||| ||||||||||| | | || | ||| || || || | |||
Sbjct 8655 TTTTGATAAACAGTCGCGATCACCAGTTTTGTGCCACTTACA-------AA----TGGTT 8607
Query 131 CACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189
||| ||| || ||||||||||||||||| |||||||||| |||||||||
Sbjct 8606 GCCCAAAAGTAAGCCTTTCTTCTCCCGAAGTTACGAAAGTATTTTGCCGAGTTCCTTAAC 8547
Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| || | | | |||||||||||||||||| |||| | ||| |||| |||||
Sbjct 8546 TATCTTTATCTCAAGAGCCTTAGTATTCTCTACCCATCCACTAGAGTCAGTTTGCGGTA 8488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694391840149
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |