Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq532 168 1e-39 >seq532 Length=9364 Score = 168 bits (186), Expect = 1e-39 Identities = 201/273 (74%), Gaps = 15/273 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || |||| || ||| |||| | | | |||| | ||| || |||||||||||| | Sbjct 8896 TATCCGGTATATTCTCCGGAACTCTATTTTCGCTGAGCAGATAGTTGAGACAGTGTGAAC 8837 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||| ||| |||| || ||| ||||||||||||||||||||| | | Sbjct 8836 GTCGTTACGCCATTCATGCAGGTCAAAAATTAATTGACAAGGAATTTCGCTACCTTTGAA 8777 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 ||||| ||||||| | ||||||||||| ||||||| ||| | ||| | Sbjct 8776 TCGTTACAGTTACGACTGCCGTTTACTGAGGCTTAA---------ATCG---GGTCTCCC 8729 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||| || | |||||| ||||||||||||| |||||||||| |||| ||| | Sbjct 8728 CAA---CCTTCACTTATCAGCACTGGGCAGGCGTCAGAACCTATACATCATCTTACGATT 8672 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||| |||||||||||| ||||||||||| Sbjct 8671 TGGCAGGTCCCTGTGTTTTTGATAAACAGTCGC 8639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062387113088