Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq532 168 1e-39
>seq532
Length=9364
Score = 168 bits (186), Expect = 1e-39
Identities = 201/273 (74%), Gaps = 15/273 (5%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
|| |||| || ||| |||| | | | |||| | ||| || |||||||||||| |
Sbjct 8896 TATCCGGTATATTCTCCGGAACTCTATTTTCGCTGAGCAGATAGTTGAGACAGTGTGAAC 8837
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|||||||||| ||| ||| |||| || ||| ||||||||||||||||||||| | |
Sbjct 8836 GTCGTTACGCCATTCATGCAGGTCAAAAATTAATTGACAAGGAATTTCGCTACCTTTGAA 8777
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
||||| ||||||| | ||||||||||| ||||||| ||| | ||| |
Sbjct 8776 TCGTTACAGTTACGACTGCCGTTTACTGAGGCTTAA---------ATCG---GGTCTCCC 8729
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| |||| || | |||||| ||||||||||||| |||||||||| |||| ||| |
Sbjct 8728 CAA---CCTTCACTTATCAGCACTGGGCAGGCGTCAGAACCTATACATCATCTTACGATT 8672
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
| |||| |||||||||||| |||||||||||
Sbjct 8671 TGGCAGGTCCCTGTGTTTTTGATAAACAGTCGC 8639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062387113088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |