Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq495 356 4e-96
seq1096 78.8 1e-12
>seq495
Length=8336
Score = 356 bits (394), Expect = 4e-96
Identities = 236/258 (91%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 5933 ACTCGCTGGCTGTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5992
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 5993 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCG 6051
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || | || |||||||||||||||||||||||||||||||||||| |||||
Sbjct 6052 TACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 6110
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6111 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGA 6170
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 6171 AAGAGCTCTCAATCTGTC 6188
>seq1096
Length=509
Score = 78.8 bits (86), Expect = 1e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
||| |||||| || |||| |||| |||||||| |||||||||||||||||||||||||
Sbjct 200 TCATTGTAGCACGTGTGCAGCCCGGAACATCTGAGGGCATCACAGACCTGTTATTGCC 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796790636853
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |