Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq532 82.4 1e-13 >seq532 Length=9364 Score = 82.4 bits (90), Expect = 1e-13 Identities = 148/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||||||||| |||| | |||||| |||||||||||| |||| ||||| || || Sbjct 9088 GGGCAGTTTTGTTGGGATGACAGCCTCCTAAAGAGTAACGGGGGCGTACAAAGGTAGGCT 9147 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| ||||| |||| || || |||| || |||| ||| || || |||| || | Sbjct 9148 CAGGTTGGACAGAAATCAACCGATGAGTGTAATGGCATAAGCCTGCTTAACTGTGAGAGA 9207 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAAT-GGAACGG 304 ||| || | ||| |||||| || | || ||| |||| | || | | || || Sbjct 9208 TACAACTCAAACAGAAGCGAAAGCTGGTCATAGTGACCCGGTCTTCCTATTTAGAAAAGG 9267 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||||||||| ||| || |||||| Sbjct 9268 AGATCGATCAACGGATAAAAGGTACTCTAGGGATA 9302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982388083488