Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq532 73.4 4e-11 >seq532 Length=9364 Score = 73.4 bits (80), Expect = 4e-11 Identities = 103/149 (69%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||||| || || ||| ||| || ||| ||| ||| | |||| ||||| Sbjct 8919 GGGTCTTTTCCTCTTGCTGCAAGTATCCGGTATATTCTCCGGAACTCTATTTTCGCTGAG 8860 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | |||||||||| ||| |||||| |||||||| || ||| || Sbjct 8859 CAGATAGTTGAGACAGTGTGAACGTCGTTACGCCATTCATGCAGGTCAAAAATTAATTGA 8800 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||| | | ||||| Sbjct 8799 CAAGGAATTTCGCTACCTTTGAATCGTTA 8771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547193569887