Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq603 143 6e-32
>seq603
Length=12139
Score = 143 bits (158), Expect = 6e-32
Identities = 149/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||| | || || ||||| | || ||||| | || |||||||| |||| ||
Sbjct 3625 TTTACGACCCATAGGCCTTCAT-CATTCACGCAGTATCA-CTGGATCAAAGTTTCCTTCA 3568
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
|||||||| ||||| | |||||||||||||||||||| || |||||||||||||| ||
Sbjct 3567 TTGTCCAAAATTCCTCCCTGCTGCCTCCCGTAGGAGTATGAACCGTGTCTCAGTTTCATC 3508
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
| | | || | | || || ||| | ||| |||| ||| ||||||||||| |||||||||
Sbjct 3507 GCGGCCGACCGTTCTTCCAAACCGGCTACCGATCTTCGACTTGGTGAGCCTTTACCTCAC 3448
Query 182 CAACTAGCTAATC 194
|||||| ||||||
Sbjct 3447 CAACTATCTAATC 3435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071986996640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |