Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq603 143 6e-32 >seq603 Length=12139 Score = 143 bits (158), Expect = 6e-32 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | || || ||||| | || ||||| | || |||||||| |||| || Sbjct 3625 TTTACGACCCATAGGCCTTCAT-CATTCACGCAGTATCA-CTGGATCAAAGTTTCCTTCA 3568 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||| ||||| | |||||||||||||||||||| || |||||||||||||| || Sbjct 3567 TTGTCCAAAATTCCTCCCTGCTGCCTCCCGTAGGAGTATGAACCGTGTCTCAGTTTCATC 3508 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 | | | || | | || || ||| | ||| |||| ||| ||||||||||| ||||||||| Sbjct 3507 GCGGCCGACCGTTCTTCCAAACCGGCTACCGATCTTCGACTTGGTGAGCCTTTACCTCAC 3448 Query 182 CAACTAGCTAATC 194 |||||| |||||| Sbjct 3447 CAACTATCTAATC 3435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071986996640