Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq532 111 6e-22 >seq532 Length=9364 Score = 111 bits (122), Expect = 6e-22 Identities = 294/441 (67%), Gaps = 30/441 (7%) Strand=Plus/Minus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 ||||| || ||||| ||||| | ||||||||||||| | | ||| || | || ||| Sbjct 7765 GACGCAATACTTAAATATTTTTCGCGAAGAACCAGCTATCTCCAGGTTCGAATAGCATTT 7706 Query 194 CACCCCTATCCACAGGTCATCC----CCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCC 249 |||| ||| |||| |||||| | | ||||| | | |||||| |||||| Sbjct 7705 CACCACTACTCACAAATCATCCGATGCTATTGCTTTCAGC---AACCGGTTCGATCCTCC 7649 Query 250 ACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGA 309 | | | |||| | |||| | ||| ||| |||||||| | | ||||||||| | Sbjct 7648 ATGAAATATTACTTTCACTTCGATCTGTTCATAAGTAGATCACCTGGTTTCGGGTCT--A 7591 Query 310 TCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTA 369 | ||| | | |||||| || |||||||||||||| || |||| || | || ||| Sbjct 7590 ACCTGCATAACTTGCGCCCTTTTAAGACTCGCTTTCGCTGCGCCTACACCTAATGGCTTA 7531 Query 370 ACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 | || || | | |||| | || | |||| ||||||| ||| | ||| Sbjct 7530 AGCTTGCTAGTGCAGATTAACTTGTTGGTCCCTTCTACAAAAGGTACG-----ATATGGC 7476 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAG-GCACAT--GGTTTCAGGTACTATTT 486 | ||||| || ||| | |||| | |||| |||||| | |||||| Sbjct 7475 ATATAAAATGC----CAGTATC------TTGTTGTTAACATTCAGTTTCAAGATCTATTT 7426 Query 487 CACTCCCCGCCA-GGGGTACT-TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTC 544 ||||||| | |||| || |||||||||||||||||||||||||| | |||||| | Sbjct 7425 CACTCCCATTTATAGGGTTCTATTTCACCTTTCCCTCACGGTACTTGTTCACTATCGATA 7366 Query 545 ACCAAGGAGTATTTAGGCTTA 565 | | || |||||||||||| Sbjct 7365 ATC-AGTTATATTTAGGCTTA 7346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817577952512