Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq532 111 6e-22
>seq532
Length=9364
Score = 111 bits (122), Expect = 6e-22
Identities = 294/441 (67%), Gaps = 30/441 (7%)
Strand=Plus/Minus
Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193
||||| || ||||| ||||| | ||||||||||||| | | ||| || | || |||
Sbjct 7765 GACGCAATACTTAAATATTTTTCGCGAAGAACCAGCTATCTCCAGGTTCGAATAGCATTT 7706
Query 194 CACCCCTATCCACAGGTCATCC----CCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCC 249
|||| ||| |||| |||||| | | ||||| | | |||||| ||||||
Sbjct 7705 CACCACTACTCACAAATCATCCGATGCTATTGCTTTCAGC---AACCGGTTCGATCCTCC 7649
Query 250 ACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGA 309
| | | |||| | |||| | ||| ||| |||||||| | | ||||||||| |
Sbjct 7648 ATGAAATATTACTTTCACTTCGATCTGTTCATAAGTAGATCACCTGGTTTCGGGTCT--A 7591
Query 310 TCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTA 369
| ||| | | |||||| || |||||||||||||| || |||| || | || |||
Sbjct 7590 ACCTGCATAACTTGCGCCCTTTTAAGACTCGCTTTCGCTGCGCCTACACCTAATGGCTTA 7531
Query 370 ACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
| || || | | |||| | || | |||| ||||||| ||| | |||
Sbjct 7530 AGCTTGCTAGTGCAGATTAACTTGTTGGTCCCTTCTACAAAAGGTACG-----ATATGGC 7476
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAG-GCACAT--GGTTTCAGGTACTATTT 486
| ||||| || ||| | |||| | |||| |||||| | ||||||
Sbjct 7475 ATATAAAATGC----CAGTATC------TTGTTGTTAACATTCAGTTTCAAGATCTATTT 7426
Query 487 CACTCCCCGCCA-GGGGTACT-TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTC 544
||||||| | |||| || |||||||||||||||||||||||||| | |||||| |
Sbjct 7425 CACTCCCATTTATAGGGTTCTATTTCACCTTTCCCTCACGGTACTTGTTCACTATCGATA 7366
Query 545 ACCAAGGAGTATTTAGGCTTA 565
| | || ||||||||||||
Sbjct 7365 ATC-AGTTATATTTAGGCTTA 7346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817577952512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |