Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq532 143 7e-32
>seq532
Length=9364
Score = 143 bits (158), Expect = 7e-32
Identities = 250/350 (71%), Gaps = 24/350 (7%)
Strand=Plus/Minus
Query 78 TTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG--ACTAGA 135
||| | ||| |||| | |||||| || ||||| |||||||| || || ||| |
Sbjct 7630 TTCGATCTGTTCATAAG-TAGATCACCTGGTTT-CGGGTCTAA---CCTGCATAACTTG- 7577
Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTG 194
|||||| ||||||||||||| |||| ||||| | |||| | | |||||||| || | ||
Sbjct 7576 CGCCCTTTTAAGACTCGCTTT-CGCTGCGCCTACACCTAATGGCTTAAGCTT-GCTAGTG 7519
Query 195 AAAAT-AAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCC 253
| || || | | || || || ||||||||||||| | | | ||| | |
Sbjct 7518 CAGATTAACTTGTTGGTCCCTTCTACAAAAGGTACGATATGGCATATAAAA------TGC 7465
Query 254 CA----CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
|| || |||| ||| | |||||| |||||||||||||||| | | |||||||
Sbjct 7464 CAGTATCTTGTTGTTAACATTCAGTTTCAAGATCTATTTCACTCCCATTTATAGGGTTCT 7405
Query 310 -TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368
|||| |||||||||||||||||| ||||||||||| | | ||||| ||||||| |||
Sbjct 7404 ATTTCACCTTTCCCTCACGGTACTTGTTCACTATCGAT-AATCAGTTATATTTAGGCTTA 7346
Query 369 GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
| | | |||| || | ||||||| | || | |||| | || ||||||
Sbjct 7345 GGAGTTAGTCCTCCTGTCTTCAGACGTAATTACACGTGTTACGCCCTACT 7296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241584939392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |