Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq532 143 7e-32 >seq532 Length=9364 Score = 143 bits (158), Expect = 7e-32 Identities = 250/350 (71%), Gaps = 24/350 (7%) Strand=Plus/Minus Query 78 TTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG--ACTAGA 135 ||| | ||| |||| | |||||| || ||||| |||||||| || || ||| | Sbjct 7630 TTCGATCTGTTCATAAG-TAGATCACCTGGTTT-CGGGTCTAA---CCTGCATAACTTG- 7577 Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTG 194 |||||| ||||||||||||| |||| ||||| | |||| | | |||||||| || | || Sbjct 7576 CGCCCTTTTAAGACTCGCTTT-CGCTGCGCCTACACCTAATGGCTTAAGCTT-GCTAGTG 7519 Query 195 AAAAT-AAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCC 253 | || || | | || || || ||||||||||||| | | | ||| | | Sbjct 7518 CAGATTAACTTGTTGGTCCCTTCTACAAAAGGTACGATATGGCATATAAAA------TGC 7465 Query 254 CA----CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 || || |||| ||| | |||||| |||||||||||||||| | | ||||||| Sbjct 7464 CAGTATCTTGTTGTTAACATTCAGTTTCAAGATCTATTTCACTCCCATTTATAGGGTTCT 7405 Query 310 -TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 |||| |||||||||||||||||| ||||||||||| | | ||||| ||||||| ||| Sbjct 7404 ATTTCACCTTTCCCTCACGGTACTTGTTCACTATCGAT-AATCAGTTATATTTAGGCTTA 7346 Query 369 GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 | | | |||| || | ||||||| | || | |||| | || |||||| Sbjct 7345 GGAGTTAGTCCTCCTGTCTTCAGACGTAATTACACGTGTTACGCCCTACT 7296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241584939392